PH01001888G0200's details annotation
1.Annotation
ICBR annotation: DNAJ heat shock N-terminal domain-containing protein, putative, expressed
Blast result AT2G41520 : 2.00E-103
Blast annotation: Heat shock protein DnaJ with tetratricopeptide repeat
2.Location
Scaffold: PH01001888
Strand: +
| Region | Start | End |
| gene | 118542 | 125801 |
| mRNA | 118542 | 125801 |
| exon | 118542 | 119441 |
| exon | 119477 | 119515 |
| exon | 119551 | 119613 |
| exon | 119973 | 120125 |
| exon | 120286 | 120527 |
| exon | 120616 | 120685 |
| exon | 121215 | 121421 |
| exon | 121578 | 121801 |
| exon | 122746 | 122824 |
| exon | 122898 | 123035 |
| exon | 124509 | 125801 |
| CDS | 119319 | 119441 |
| CDS | 119477 | 119515 |
| CDS | 119551 | 119613 |
| CDS | 119973 | 120125 |
| CDS | 120286 | 120527 |
| CDS | 120616 | 120685 |
| CDS | 121215 | 121421 |
| CDS | 121578 | 121801 |
| CDS | 122746 | 122824 |
| CDS | 122898 | 123035 |
| CDS | 124509 | 124700 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00226.30 | DnaJ | 369 | 451 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.