PH01001918G0130's details annotation
1.Annotation
ICBR annotation: protein of unknown function DUF1279 domain containing protein, expressed
Blast result AT2G27290 : 3.20E-42
Blast annotation: Protein of unknown function (DUF1279)
2.Location
Scaffold: PH01001918
Strand: -
| Region | Start | End |
| gene | 98034 | 100622 |
| mRNA | 98034 | 100622 |
| exon | 98034 | 98904 |
| exon | 99021 | 99215 |
| exon | 99295 | 100622 |
| CDS | 98746 | 98904 |
| CDS | 99021 | 99215 |
| CDS | 99295 | 99534 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06916.12 | DUF1279 | 102 | 184 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.