PH01002069G0170's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G06660 : 7.40E-23
Blast annotation: -
2.Location
Scaffold: PH01002069
Strand: -
| Region | Start | End |
| gene | 120159 | 125768 |
| mRNA | 120159 | 125768 |
| exon | 120159 | 120398 |
| exon | 120799 | 120899 |
| exon | 122133 | 122215 |
| exon | 122307 | 123123 |
| exon | 123215 | 123285 |
| exon | 124247 | 124320 |
| exon | 124428 | 124482 |
| exon | 124595 | 125768 |
| CDS | 120190 | 120398 |
| CDS | 120799 | 120899 |
| CDS | 122133 | 122215 |
| CDS | 122307 | 123123 |
| CDS | 123215 | 123285 |
| CDS | 124247 | 124320 |
| CDS | 124428 | 124482 |
| CDS | 124595 | 124714 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.