PH01002170G0290's details annotation
1.Annotation
ICBR annotation: protein kinase family protein, putative, expressed
Blast result AT1G22870 : 0.00E+00
Blast annotation: Protein kinase family protein with ARM repeat domain
2.Location
Scaffold: PH01002170
Strand: +
| Region | Start | End |
| gene | 196680 | 205646 |
| mRNA | 196680 | 205646 |
| exon | 196680 | 197370 |
| exon | 199173 | 199283 |
| exon | 199660 | 199842 |
| exon | 200010 | 200136 |
| exon | 200278 | 200339 |
| exon | 200584 | 200670 |
| exon | 201300 | 201386 |
| exon | 201813 | 201926 |
| exon | 202133 | 202261 |
| exon | 202462 | 202524 |
| exon | 203182 | 203343 |
| exon | 203452 | 203570 |
| exon | 203645 | 205646 |
| CDS | 196879 | 197370 |
| CDS | 199173 | 199283 |
| CDS | 199660 | 199842 |
| CDS | 200010 | 200136 |
| CDS | 200278 | 200339 |
| CDS | 200584 | 200670 |
| CDS | 201300 | 201386 |
| CDS | 201813 | 201926 |
| CDS | 202133 | 202261 |
| CDS | 202462 | 202524 |
| CDS | 203182 | 203343 |
| CDS | 203452 | 203570 |
| CDS | 203645 | 204710 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 139 | 309 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005488 | binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.