PH01002263G0230's details annotation
1.Annotation
ICBR annotation: heat shock protein DnaJ, putative, expressed
Blast result AT1G08640 : 7.80E-59
Blast annotation: Chloroplast J-like domain 1
2.Location
Scaffold: PH01002263
Strand: +
| Region | Start | End |
| gene | 121583 | 130232 |
| mRNA | 121583 | 130232 |
| exon | 121583 | 121690 |
| exon | 122021 | 122125 |
| exon | 122216 | 122293 |
| exon | 122819 | 122874 |
| exon | 125546 | 125603 |
| exon | 126252 | 126377 |
| exon | 126871 | 126966 |
| exon | 127109 | 127180 |
| exon | 127873 | 127970 |
| exon | 128076 | 128265 |
| exon | 128678 | 128819 |
| exon | 128947 | 128985 |
| exon | 129926 | 130232 |
| CDS | 121658 | 121690 |
| CDS | 122021 | 122125 |
| CDS | 122216 | 122293 |
| CDS | 122819 | 122874 |
| CDS | 125546 | 125603 |
| CDS | 126252 | 126377 |
| CDS | 126871 | 126966 |
| CDS | 127109 | 127180 |
| CDS | 127873 | 127970 |
| CDS | 128076 | 128265 |
| CDS | 128678 | 128819 |
| CDS | 128947 | 128985 |
| CDS | 129926 | 129990 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14291.5 | DUF4371 | 310 | 349 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.