PH01002425G0220's details annotation
1.Annotation
ICBR annotation: AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed
Blast result AT3G17850 : 0.00E+00
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01002425
Strand: -
| Region | Start | End |
| gene | 143687 | 157330 |
| mRNA | 143687 | 157330 |
| exon | 143687 | 146478 |
| exon | 146634 | 147170 |
| exon | 147293 | 147667 |
| exon | 147929 | 148009 |
| exon | 148807 | 149041 |
| exon | 149229 | 149398 |
| exon | 149855 | 151171 |
| exon | 151304 | 151489 |
| exon | 152740 | 153244 |
| exon | 155338 | 155417 |
| exon | 156252 | 157330 |
| CDS | 146242 | 146478 |
| CDS | 146634 | 147170 |
| CDS | 147293 | 147667 |
| CDS | 147929 | 148009 |
| CDS | 148807 | 149041 |
| CDS | 149229 | 149398 |
| CDS | 149855 | 151171 |
| CDS | 151304 | 151489 |
| CDS | 152740 | 153244 |
| CDS | 155338 | 155417 |
| CDS | 156252 | 156371 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.