PH01002667G0100's details annotation
1.Annotation
ICBR annotation: NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed
Blast result AT3G03100 : 1.20E-68
Blast annotation: NADH:ubiquinone oxidoreductase, 17.2kDa subunit
2.Location
Scaffold: PH01002667
Strand: -
| Region | Start | End |
| gene | 85704 | 90240 |
| mRNA | 85704 | 90240 |
| exon | 85704 | 86057 |
| exon | 86466 | 86518 |
| exon | 86877 | 86968 |
| exon | 88180 | 90240 |
| CDS | 85893 | 86057 |
| CDS | 86466 | 86518 |
| CDS | 86877 | 86968 |
| CDS | 88180 | 88268 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05071.15 | NDUFA12 | 49 | 154 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Oxidative phosphorylation | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 12 [EC:1.6.5.3;EC:1.6.99.3] | ko00190 | K11352 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity |
| GO:0009055 | electron carrier activity |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.