Annotation of co-expression genes

PH01002735G0260's details annotation

1.Annotation

ICBR annotation: gibberellin receptor GID1L2, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01002735
Strand: -

RegionStartEnd
gene181000185540
mRNA181000185540
exon181000181310
exon183795183869
exon184379185540
CDS181289181310
CDS183795183869
CDS184379184743

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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