PH01002764G0200's details annotation
1.Annotation
ICBR annotation: BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed
Blast result AT4G02680 : 0.00E+00
Blast annotation: ETO1-like 1
2.Location
Scaffold: PH01002764
Strand: -
| Region | Start | End |
| gene | 148356 | 154792 |
| mRNA | 148356 | 154792 |
| exon | 148356 | 148718 |
| exon | 150121 | 150430 |
| exon | 151183 | 151474 |
| exon | 151569 | 153281 |
| exon | 153368 | 153542 |
| exon | 154722 | 154792 |
| CDS | 148498 | 148718 |
| CDS | 150121 | 150430 |
| CDS | 151183 | 151474 |
| CDS | 151569 | 153281 |
| CDS | 153368 | 153542 |
| CDS | 154722 | 154770 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.