PH01002905G0240's details annotation
1.Annotation
ICBR annotation: anthranilate phosphoribosyltransferase, putative, expressed
Blast result AT1G22610 : 7.00E-172
Blast annotation: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
2.Location
Scaffold: PH01002905
Strand: -
| Region | Start | End |
| gene | 159251 | 160750 |
| mRNA | 159251 | 160750 |
| exon | 159251 | 160259 |
| exon | 160298 | 160750 |
| CDS | 159258 | 160259 |
| CDS | 160298 | 160423 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00168.29 | C2 | 6 | 75 |
| PF08372.9 | PRT_C | 220 | 375 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.