Gene details

Annotation of co-expression genes

PH01003191G0030's details annotation

1.Annotation

ICBR annotation: RNA polymerase III RPC4 domain containing protein, expressed

Blast result AT5G09380 : 3.00E-36
Blast annotation: RNA polymerase III RPC4

2.Location

Scaffold: PH01003191
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	null	null

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF05132.13	RNA_pol_Rpc4	190	313

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Purine metabolism	DNA-directed RNA polymerase III subunit RPC4[EC:2.7.7.6]	ko00230	K03026
Pyrimidine metabolism	DNA-directed RNA polymerase III subunit RPC4[EC:2.7.7.6]	ko00240	K03026
RNA polymerase	DNA-directed RNA polymerase III subunit RPC4[EC:2.7.7.6]	ko03020	K03026

10.Gene Ontology

GO Accession	GO Annotation
GO:0003677	DNA binding
GO:0003899	DNA-directed RNA polymerase activity
GO:0005666	DNA-directed RNA polymerase III complex
GO:0006383	transcription from RNA polymerase III promoter

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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