PH01003327G0010's details annotation
1.Annotation
ICBR annotation: uncharacterized protein ycf44, putative, expressed
Blast result AT1G49380 : 0.00E+00
Blast annotation: cytochrome c biogenesis protein family
2.Location
Scaffold: PH01003327
Strand: +
| Region | Start | End |
| gene | 11187 | 15851 |
| mRNA | 11187 | 15851 |
| exon | 11187 | 13086 |
| exon | 13154 | 13373 |
| exon | 13470 | 13581 |
| exon | 13759 | 14031 |
| exon | 14115 | 14380 |
| exon | 14471 | 14627 |
| exon | 14720 | 14803 |
| exon | 14896 | 15851 |
| CDS | 12705 | 13086 |
| CDS | 13154 | 13373 |
| CDS | 13470 | 13581 |
| CDS | 13759 | 14031 |
| CDS | 14115 | 14380 |
| CDS | 14471 | 14627 |
| CDS | 14720 | 14803 |
| CDS | 14896 | 15036 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05140.13 | ResB | 113 | 377 |
| PF05140.13 | ResB | 402 | 525 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.