PH01003334G0070's details annotation
1.Annotation
ICBR annotation: peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
Blast result AT3G25220 : 5.40E-60
Blast annotation: FK506-binding protein 15 kD-1
2.Location
Scaffold: PH01003334
Strand: +
| Region | Start | End |
| gene | 47808 | 49922 |
| mRNA | 47808 | 49922 |
| exon | 47808 | 47956 |
| exon | 48039 | 48115 |
| exon | 48790 | 48852 |
| exon | 49297 | 49387 |
| exon | 49478 | 49582 |
| exon | 49794 | 49922 |
| CDS | 47896 | 47956 |
| CDS | 48039 | 48115 |
| CDS | 48790 | 48852 |
| CDS | 49297 | 49387 |
| CDS | 49478 | 49582 |
| CDS | 49794 | 49888 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00254.27 | FKBP_C | 44 | 135 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006457 | protein folding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.