PH01003416G0040's details annotation
1.Annotation
ICBR annotation: dnaJ domain containing protein, expressed
Blast result AT4G28480 : 1.00E-128
Blast annotation: DNAJ heat shock family protein
2.Location
Scaffold: PH01003416
Strand: +
| Region | Start | End |
| gene | 52399 | 57453 |
| mRNA | 52399 | 57453 |
| exon | 52399 | 52991 |
| exon | 53727 | 54154 |
| exon | 56836 | 57453 |
| CDS | 52827 | 52991 |
| CDS | 53727 | 54154 |
| CDS | 56836 | 57274 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00226.30 | DnaJ | 4 | 67 |
| PF01556.17 | DnaJ_C | 168 | 326 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006457 | protein folding |
| GO:0051082 | unfolded protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.