PH01003522G0160's details annotation
1.Annotation
ICBR annotation: DUF250 domain containing protein, putative, expressed
Blast result AT5G46110 : 5.80E-73
Blast annotation: Glucose-6-phosphate/phosphate translocator-related
2.Location
Scaffold: PH01003522
Strand: -
| Region | Start | End |
| gene | 117979 | 125284 |
| mRNA | 117979 | 125284 |
| exon | 117979 | 118948 |
| exon | 120874 | 120974 |
| exon | 121091 | 121190 |
| exon | 122121 | 122237 |
| exon | 123386 | 123502 |
| exon | 124028 | 124105 |
| exon | 124207 | 125284 |
| CDS | 118751 | 118948 |
| CDS | 120874 | 120974 |
| CDS | 121091 | 121190 |
| CDS | 122121 | 122237 |
| CDS | 123386 | 123502 |
| CDS | 124028 | 124105 |
| CDS | 124207 | 124311 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03151.15 | TPT | 1 | 101 |
| PF03151.15 | TPT | 117 | 195 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.