PH01003760G0070's details annotation
1.Annotation
ICBR annotation: endonuclease/Exonuclease/phosphatase family protein, expressed
Blast result AT1G11800 : 1.40E-98
Blast annotation: endonuclease/exonuclease/phosphatase family protein
2.Location
Scaffold: PH01003760
Strand: +
| Region | Start | End |
| gene | 46905 | 52034 |
| mRNA | 46905 | 52034 |
| exon | 46905 | 47630 |
| exon | 48905 | 49050 |
| exon | 49095 | 49229 |
| exon | 50097 | 52034 |
| CDS | 47519 | 47630 |
| CDS | 48905 | 49050 |
| CDS | 49095 | 49229 |
| CDS | 50097 | 50693 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03372.22 | Exo_endo_phos | 52 | 315 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.