PH01003907G0020's details annotation
1.Annotation
ICBR annotation: Kinesin motor domain domain containing protein, expressed
Blast result AT3G23670 : 5.00E-118
Blast annotation: phragmoplast-associated kinesin-related protein, putative
2.Location
Scaffold: PH01003907
Strand: +
| Region | Start | End |
| gene | 6622 | 19694 |
| mRNA | 6622 | 19694 |
| exon | 6622 | 7162 |
| exon | 7346 | 7597 |
| exon | 9753 | 9836 |
| exon | 10310 | 10363 |
| exon | 10433 | 10528 |
| exon | 10857 | 10952 |
| exon | 11153 | 11298 |
| exon | 12064 | 12216 |
| exon | 12300 | 12429 |
| exon | 12495 | 13061 |
| exon | 13163 | 13261 |
| exon | 13347 | 13499 |
| exon | 13622 | 14383 |
| exon | 16605 | 16708 |
| exon | 17665 | 17746 |
| exon | 18546 | 19694 |
| CDS | 6929 | 7162 |
| CDS | 7346 | 7597 |
| CDS | 9753 | 9836 |
| CDS | 10310 | 10363 |
| CDS | 10433 | 10528 |
| CDS | 10857 | 10952 |
| CDS | 11153 | 11298 |
| CDS | 12064 | 12216 |
| CDS | 12300 | 12429 |
| CDS | 12495 | 13061 |
| CDS | 13163 | 13261 |
| CDS | 13347 | 13499 |
| CDS | 13622 | 14383 |
| CDS | 16605 | 16708 |
| CDS | 17665 | 17746 |
| CDS | 18546 | 18854 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12854.6 | PPR_1 | 37 | 64 |
| PF13041.5 | PPR_2 | 99 | 144 |
| PF00225.22 | Kinesin | 191 | 390 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003777 | microtubule motor activity |
| GO:0005524 | ATP binding |
| GO:0005875 | microtubule associated complex |
| GO:0007018 | microtubule-based movement |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.