PH01003995G0080's details annotation
1.Annotation
ICBR annotation: FG-GAP repeat-containing protein, putative, expressed
Blast result AT3G51050 : 8.00E-145
Blast annotation: FG-GAP repeat-containing protein
2.Location
Scaffold: PH01003995
Strand: -
| Region | Start | End |
| gene | 70166 | 73807 |
| mRNA | 70166 | 73807 |
| exon | 70166 | 70467 |
| exon | 70528 | 70731 |
| exon | 70818 | 70871 |
| exon | 71159 | 71209 |
| exon | 71369 | 71464 |
| exon | 71627 | 71719 |
| exon | 71879 | 71956 |
| exon | 72604 | 73146 |
| exon | 73250 | 73807 |
| CDS | 70450 | 70467 |
| CDS | 70528 | 70731 |
| CDS | 70818 | 70871 |
| CDS | 71159 | 71209 |
| CDS | 71369 | 71464 |
| CDS | 71627 | 71719 |
| CDS | 71879 | 71956 |
| CDS | 72604 | 73146 |
| CDS | 73250 | 73312 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.