Annotation of co-expression genes

PH01005246G0060's details annotation

1.Annotation

ICBR annotation: UPF0041 domain containing protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01005246
Strand: -

RegionStartEnd
gene4457346866
mRNA4457346866
exon4457345370
exon4640846866
CDS4525845370
CDS4640846741

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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