PH01008783G0010's details annotation
1.Annotation
ICBR annotation: G-protein alpha subunit, putative, expressed
Blast result AT1G31930 : 0.00E+00
Blast annotation: extra-large GTP-binding protein 3
2.Location
Scaffold: PH01008783
Strand: -
| Region | Start | End |
| gene | 1585 | 9505 |
| mRNA | 1585 | 9505 |
| exon | 1585 | 2279 |
| exon | 2444 | 2641 |
| exon | 2727 | 2899 |
| exon | 3298 | 3542 |
| exon | 3626 | 3803 |
| exon | 4181 | 4363 |
| exon | 4469 | 4573 |
| exon | 5670 | 5807 |
| exon | 5886 | 9505 |
| CDS | 1892 | 2279 |
| CDS | 2444 | 2641 |
| CDS | 2727 | 2899 |
| CDS | 3298 | 3542 |
| CDS | 3626 | 3803 |
| CDS | 4181 | 4363 |
| CDS | 4469 | 4573 |
| CDS | 5670 | 5807 |
| CDS | 5886 | 6854 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00503.19 | G-alpha | 443 | 826 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003924 | GTPase activity |
| GO:0004871 | signal transducer activity |
| GO:0007165 | signal transduction |
| GO:0007186 | G-protein coupled receptor signaling pathway |
| GO:0019001 | guanyl nucleotide binding |
| GO:0031683 | G-protein beta/gamma-subunit complex binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.