CFinderADM000177's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.74E-05 | GO:0000472 |
| small-subunit processome assembly | 1.74E-05 | GO:0034462 |
| endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.93E-05 | GO:0000480 |
| endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.18E-05 | GO:0000447 |
| nucleolus | 0.005422676 | GO:0005730 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003717 | - | - |
| CRO_T005869 | - | - |
| CRO_T013982 | - | - |
| CRO_T018833 | - | - |
| CRO_T023868 | - | - |
| CRO_T029131 | - | - |
| CRO_T029746 | - | - |
| CRO_T031683 | - | - |
| CRO_T033158 | AT3G56510 (8.00E-25) | RNA-binding (RRM/RBD/RNP motifs) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000103 | Transcription_related, Transcription factor: TCP | details |
| CFinderADM000110 | Protein processing in endoplasmic reticulum | details |
| CFinderADM000176 | details | |
| CFinderADM000274 | details | |
| CFinderADM000275 | details | |
| CFinderADM000276 | details | |
| CFinderADM000700 | radial pattern formation basipetal auxin transport meristem structural organization leaf vascular tissue pattern formation leaf morphogenesis multidimensional cell growth small GTPase mediated signal transduction GTP binding endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) small-subunit processome assembly endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) intracellular endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) nucleolus RNA binding nucleotide binding | details |
Expression profiles
 Show details about module gene expression profiling |