CFinderADM000244's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 2.22E-06 | ubs family |
| proton-transporting two-sector ATPase complex, catalytic domain | 1.69E-05 | GO:0033178 |
| cellular protein metabolic process | 0.000472294 | GO:0044267 |
| ATP hydrolysis coupled proton transport | 0.000472294 | GO:0015991 |
| proton-transporting ATPase activity, rotational mechanism | 0.000944588 | GO:0046961 |
| adenosine ribonucleotides de novo biosynthesis | 0.000944588 | plantCyc |
| very long chain fatty acid biosynthesis I | 0.00111238 | plantCyc |
| very long chain fatty acid biosynthesis II | 0.001232888 | plantCyc |
| vacuole | 0.00347492 | GO:0005773 |
| Oxidative phosphorylation | 0.010090138 | KEGG pathway |
| transcription factor activity, sequence-specific DNA binding | 0.027315981 | GO:0003700 |
| regulation of transcription, DNA-templated | 0.039650386 | GO:0006355 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003233 | AT1G12855 (6.00E-05) | F-box family protein |
| CRO_T006989 | AT4G11150 (4.00E-80) | emb2448|embryo defective 2448; TUF|vacuolar ATP synthase subunit E1 |
| CRO_T007269 | - | - |
| CRO_T016977 | AT1G47790 (1.00E-15) | F-box and associated interaction domains-containing protein |
| CRO_T024745 | AT5G02540 (1.00E-118) | NAD(P)-binding Rossmann-fold superfamily protein |
| CRO_T028043 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000154 | cellular protein metabolic process very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II Ubiquitin_Proteasome_system, E3 adaptor: F-box transcription factor activity, sequence-specific DNA binding regulation of transcription, DNA-templated | details |
| CFinderADM000251 | Transcription_related, Transcription factor: WRKY positive regulation of cell death positive regulation of defense response negative regulation of cell size Cytochrome_P450, Cytochrome P450: CYP75B Protein_kinases_phosphatases, PPC:1.12.5: Leucine Rich Repeat Kinase X Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: BC-box inflorescence morphogenesis Brassinosteroid biosynthesis phytocassanes biosynthesis, shared reactions regulation of transcription, DNA-templated anthocyanidin modification (Arabidopsis) anthocyanin biosynthesis anthocyanin biosynthesis (delphinidin 3-O-glucoside) anthocyanin biosynthesis (pelargonidin 3-O-glucoside) gossypetin metabolism guanosine nucleotides degradation I guanosine nucleotides degradation II luteolin biosynthesis Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase pyrimidine salvage pathway protein tyrosine kinase activity 5'-nucleotidase activity leaf morphogenesis volatile benzenoid biosynthesis I (ester formation) adenosine nucleotides degradation I brassinosteroids inactivation flavonol biosynthesis quercetin glucoside biosynthesis (Allium) DNA binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 galactosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) protein glycosylation transcription factor activity, sequence-specific DNA binding peptidyl-tyrosine phosphorylation very long chain fatty acid biosynthesis I secologanin and strictosidine biosynthesis calmodulin-dependent protein kinase activity benzoate biosynthesis I (CoA-dependent, β-oxidative) very long chain fatty acid biosynthesis II Transcription_related, Transcription factor: NAC | details |
| CFinderADM000318 | proton-transporting two-sector ATPase complex, catalytic domain acetyl-CoA C-acetyltransferase activity mevalonate pathway I proton-transporting ATPase activity, rotational mechanism ATP hydrolysis coupled proton transport adenosine ribonucleotides de novo biosynthesis very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II vacuole Carbon metabolism Oxidative phosphorylation metabolic process | details |
| CFinderADM000601 | proton-transporting two-sector ATPase complex, catalytic domain formation of glycosidic bonds, GlycosylTransferases: GTnc phosphorelay signal transduction system ATP hydrolysis coupled proton transport Transcription_related, Transcription factor: Orphans adenosine ribonucleotides de novo biosynthesis very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II proton-transporting ATPase activity, rotational mechanism Transcription_related, Transcription factor: ERF vacuole | details |
| CFinderADM001072 | Cytochrome_P450, Cytochrome P450: CYP75B phytocassanes biosynthesis, shared reactions Brassinosteroid biosynthesis gossypetin metabolism luteolin biosynthesis Transcription_related, Transcription factor: WRKY flavonol biosynthesis secologanin and strictosidine biosynthesis very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen heme binding iron ion binding | details |
Expression profiles
 Show details about module gene expression profiling |