CFinderADM000355's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: B3 | 6.09E-07 | TF family |
| geranyltranstransferase activity | 0.000176862 | GO:0004337 |
| trans, trans-farnesyl diphosphate biosynthesis | 0.00024673 | plantCyc |
| geranylgeranyl diphosphate biosynthesis | 0.00024673 | plantCyc |
| polyisoprenoid biosynthesis | 0.00024673 | plantCyc |
| superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) | 0.00024673 | plantCyc |
| superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) | 0.00024673 | plantCyc |
| dimethylallyltranstransferase activity | 0.000323608 | GO:0004161 |
| isoprenoid biosynthetic process | 0.001118159 | GO:0008299 |
| Terpenoid backbone biosynthesis | 0.001633661 | KEGG pathway |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.001838301 | cazy family |
| hydrolase activity, acting on glycosyl bonds | 0.001929549 | GO:0016798 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.002154931 | cazy family |
| phosphoprotein phosphatase activity | 0.003003189 | GO:0004721 |
| methyltransferase activity | 0.009008206 | GO:0008168 |
| methylation | 0.030182634 | GO:0032259 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000557 | AT1G22800 (6.00E-147) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T006816 | - | - |
| CRO_T012469 | AT5G24940 (4.00E-26) | Protein phosphatase 2C family protein |
| CRO_T017585 | AT4G30430 (8.00E-30) | TET9|tetraspanin9 |
| CRO_T017879 | - | - |
| CRO_T020502 | AT5G47770 (2.00E-151) | FPS1|farnesyl diphosphate synthase 1 |
| CRO_T020940 | AT3G28420 (2.00E-06) | Putative membrane lipoprotein |
| CRO_T021985 | AT1G65240 (1.00E-21) | Eukaryotic aspartyl protease family protein |
| CRO_T022831 | AT4G17620 (2.00E-101) | glycine-rich protein |
| CRO_T023301 | - | - |
| CRO_T030027 | AT1G33220 (3.00E-67) | Glycosyl hydrolase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000517 | Transcription_related, Transcription factor: B3 phosphoprotein phosphatase activity transporter activity transmembrane transport plasmodesma integral component of membrane | details |
| CFinderADM000569 | anchored component of membrane cellulose microfibril organization cell growth DNA replication adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc hydrolase activity, acting on glycosyl bonds metabolic process | details |
| CFinderADM000826 | hydrolase activity, acting on ester bonds Ubiquitin_Proteasome_system, E3 adaptor: DWD Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM001082 | geranyltranstransferase activity dimethylallyltranstransferase activity isoprenoid biosynthetic process trans, trans-farnesyl diphosphate biosynthesis geranylgeranyl diphosphate biosynthesis polyisoprenoid biosynthesis superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) Terpenoid backbone biosynthesis Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM001555 | sphingomyelin phosphodiesterase activity voltage-gated chloride channel activity Ras signaling pathway chloride transport cellulase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 regulation of anion transmembrane transport cellulose catabolic process unidimensional cell growth ion transmembrane transport hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Ubiquitin_Proteasome_system, E3 adaptor: BTB small GTPase mediated signal transduction transporter activity GTP binding transmembrane transport | details |
Expression profiles
 Show details about module gene expression profiling |