CFinderADM000358's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| telomeric loop formation | 6.93E-06 | GO:0031627 |
| double-stranded telomeric DNA binding | 1.71E-05 | GO:0003691 |
| nuclear chromosome, telomeric region | 7.68E-05 | GO:0000784 |
| nucleosome assembly | 8.87E-05 | GO:0006334 |
| calcium ion transmembrane transport | 8.87E-05 | GO:0070588 |
| calcium-transporting ATPase activity | 8.95E-05 | GO:0005388 |
| Transcription_related, Transcription factor: MYB-related | 0.00019217 | TF family |
| nucleosome | 0.000448971 | GO:0000786 |
| intracellular membrane-bounded organelle | 0.005780966 | GO:0043231 |
| integral component of plasma membrane | 0.005780966 | GO:0005887 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000577 | AT1G49950 (2.00E-41) | ATTRB1|TELOMERE REPEAT BINDING FACTOR 1 |
| CRO_T011743 | AT3G22910 (0) | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
| CRO_T020259 | - | - |
| CRO_T023442 | - | - |
| CRO_T028937 | AT5G54310 (2.00E-15) | AGD5|ARF-GAP domain 5; NEV|NEVERSHED |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000357 | regulation of anion channel activity regulation of stomatal movement hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase Transcription_related, Transcription factor: C3H Ubiquitin_Proteasome_system, E3 adaptor: BTB calmodulin-dependent protein kinase activity pectinesterase inhibitor activity aspartyl esterase activity calcium-dependent protein serine/threonine kinase activity pectin catabolic process abscisic acid-activated signaling pathway protein autophosphorylation response to salt stress peptidyl-serine phosphorylation negative regulation of catalytic activity cell wall modification pectinesterase activity Pentose and glucuronate interconversions Plant-pathogen interaction calmodulin binding intracellular signal transduction calcium ion binding vacuole cell wall extracellular region | details |
| CFinderADM000868 | double-stranded telomeric DNA binding telomeric loop formation nuclear chromosome, telomeric region Circadian rhythm - plant nucleosome assembly nucleosome Transcription_related, Transcription factor: MYB-related Transcription_related, Transcription factor: Orphans aspartic-type endopeptidase activity phosphorelay signal transduction system lipid metabolic process MAPK signaling pathway - plant intracellular proteolysis | details |
| CFinderADM001279 | TFIIK complex FAD diphosphatase activity flavin-containing compound metabolic process response to abiotic stimulus positive regulation of cyclin-dependent protein serine/threonine kinase activity positive regulation of phosphorylation of RNA polymerase II C-terminal domain cyclin-dependent protein kinase holoenzyme complex cyclin-dependent protein serine/threonine kinase regulator activity positive regulation of transcription from RNA polymerase II promoter calcium ion transmembrane transport calcium-transporting ATPase activity Basal transcription factors Purine metabolism integral component of plasma membrane intracellular membrane-bounded organelle transcription, DNA-templated | details |
| CFinderADM001280 | TFIIK complex cyclin-dependent protein kinase holoenzyme complex response to abiotic stimulus positive regulation of phosphorylation of RNA polymerase II C-terminal domain positive regulation of cyclin-dependent protein serine/threonine kinase activity cyclin-dependent protein serine/threonine kinase regulator activity positive regulation of transcription from RNA polymerase II promoter calcium ion transmembrane transport calcium-transporting ATPase activity Basal transcription factors integral component of plasma membrane intracellular membrane-bounded organelle Ubiquitin_Proteasome_system, E3: RING transcription, DNA-templated | details |
| CFinderADM001831 | Vasopressin-regulated water reabsorption Rho GDP-dissociation inhibitor activity double-stranded telomeric DNA binding telomeric loop formation Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I nuclear chromosome, telomeric region MAP kinase kinase kinase activity nucleosome assembly activation of MAPKK activity regulation of catalytic activity MAPK cascade nucleosome Transcription_related, Transcription factor: MYB-related adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 intracellular Ubiquitin_Proteasome_system, E3: RING | details |
Expression profiles
 Show details about module gene expression profiling |