CFinderADM000370's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| spermidine biosynthesis I | 2.97E-05 | plantCyc |
| spermine biosynthesis | 2.97E-05 | plantCyc |
| intracellular auxin transport | 6.67E-05 | GO:0080162 |
| carbon-oxygen lyase activity, acting on phosphates | 7.23E-05 | GO:0016838 |
| adenosylmethionine decarboxylase activity | 7.59E-05 | GO:0004014 |
| spermine biosynthetic process | 0.000155531 | GO:0006597 |
| single-multicellular organism process | 0.000155531 | GO:0044707 |
| S-adenosylmethioninamine biosynthetic process | 0.000155531 | GO:0006557 |
| Transcription_related, Transcription factor: SBP | 0.000158383 | TF family |
| auxin efflux transmembrane transporter activity | 0.000158768 | GO:0010329 |
| spermidine biosynthetic process | 0.000159937 | GO:0008295 |
| auxin efflux | 0.000166561 | GO:0010315 |
| auxin homeostasis | 0.000174451 | GO:0010252 |
| Transcription_related, Transcription factor: MIKC | 0.000197558 | TF family |
| single-organism developmental process | 0.00026612 | GO:0044767 |
| carbohydrate transmembrane transport | 0.00026612 | GO:0034219 |
| anatomical structure development | 0.00026612 | GO:0048856 |
| sugar transmembrane transporter activity | 0.000342147 | GO:0051119 |
| Sesquiterpenoid and triterpenoid biosynthesis | 0.000497494 | KEGG pathway |
| Cysteine and methionine metabolism | 0.000592126 | KEGG pathway |
| auxin polar transport | 0.001126208 | GO:0009926 |
| pollen development | 0.001530626 | GO:0009555 |
| auxin-activated signaling pathway | 0.001530626 | GO:0009734 |
| response to stress | 0.002592566 | GO:0006950 |
| protein dimerization activity | 0.007301907 | GO:0046983 |
| transcription factor activity, sequence-specific DNA binding | 0.023087823 | GO:0003700 |
| transmembrane transport | 0.033006551 | GO:0055085 |
| transcription, DNA-templated | 0.036700569 | GO:0006351 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001106 | AT3G19550 (7.00E-13) | unknown protein |
| CRO_T009533 | AT1G70940 (4.00E-44) | ATPIN3|ARABIDOPSIS PIN-FORMED 3; PIN3|PIN-FORMED 3 |
| CRO_T013436 | AT5G53190 (3.00E-40) | AtSWEET3; SWEET3|Nodulin MtN3 family protein |
| CRO_T016175 | AT1G69170 (1.00E-27) | SPL6|SQUAMOSA PROMOTER BINDING PROTEIN (SBP)-domain transcription factor 6 |
| CRO_T022802 | AT4G37940 (3.00E-34) | AGL21|AGAMOUS-like 21 |
| CRO_T023892 | AT4G16740 (3.00E-44) | ATTPS03|terpene synthase 03 |
| CRO_T028749 | AT3G02470 (3.00E-52) | SAMDC|S-adenosylmethionine decarboxylase |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000371 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc carbon-oxygen lyase activity, acting on phosphates glycopeptide alpha-N-acetylgalactosaminidase activity sucrose alpha-glucosidase activity alpha-Linolenic acid metabolism Sesquiterpenoid and triterpenoid biosynthesis redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 fatty acid α-oxidation I acetaldehyde biosynthesis I pyruvate fermentation to ethanol II very long chain fatty acid biosynthesis I oxidoreductase activity, acting on CH-OH group of donors very long chain fatty acid biosynthesis II peroxidase activity flavin adenine dinucleotide binding dioxygenase activity response to oxidative stress cellular oxidant detoxification oxidation-reduction process heme binding metabolic process | details |
| CFinderADM000953 | auxin efflux transmembrane transporter activity auxin efflux plasma membrane oxidized GTP and dGTP detoxification intracellular auxin transport acropetal auxin transport formation of organ boundary 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I integral component of membrane anthocyanin accumulation in tissues in response to UV light regulation of cell size spermidine biosynthesis I spermine biosynthesis lateral root development S-adenosylmethioninamine biosynthetic process adenosylmethionine decarboxylase activity cyclin-dependent protein serine/threonine kinase activity spermine biosynthetic process response to blue light response to far red light basipetal auxin transport stamen development spermidine biosynthetic process auxin homeostasis positive gravitropism xenobiotic-transporting ATPase activity regulation of cell cycle xenobiotic transport Protein_kinases_phosphatases, PPC:1.11.1: Legume Lectin Domain Kinase tetrahydrofolate biosynthesis II oligopeptide transport photomorphogenesis ABC transporters Cysteine and methionine metabolism auxin polar transport pollen development auxin-activated signaling pathway response to auxin drug transmembrane transport carbohydrate binding transporter activity endoplasmic reticulum adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 ATP binding transmembrane transport hydrolase activity | details |
| CFinderADM001015 | 17-O-deacetylvindoline O-acetyltransferase activity oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor intracellular auxin transport Transcription_related, Transcription factor: NF-YA auxin efflux transmembrane transporter activity Transcription_related, Transcription factor: OFP auxin efflux auxin homeostasis 2-oxoglutarate decarboxylation to succinyl-CoA glycine cleavage pyruvate decarboxylation to acetyl CoA 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Antigen processing and presentation vindoline and vinblastine biosynthesis auxin polar transport pollen development auxin-activated signaling pathway cell flavin adenine dinucleotide binding cell redox homeostasis Carbon metabolism endoplasmic reticulum transmembrane transport | details |
Expression profiles
 Show details about module gene expression profiling |