CFinderADM000442's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| alanine-glyoxylate transaminase activity | 6.42E-11 | GO:0008453 |
| Alanine, aspartate and glutamate metabolism | 4.89E-10 | KEGG pathway |
| identical protein binding | 1.48E-07 | GO:0042802 |
| pyridoxal phosphate binding | 4.12E-06 | GO:0030170 |
| threonine catabolic process | 8.87E-06 | GO:0006567 |
| arginine catabolic process to glutamate | 8.87E-06 | GO:0019544 |
| L-allo-threonine aldolase activity | 9.55E-06 | GO:0008732 |
| glycine biosynthetic process | 1.18E-05 | GO:0006545 |
| glycine biosynthesis III | 4.90E-05 | plantCyc |
| Cytochrome_P450, Cytochrome P450: CYP76C | 4.90E-05 | CYP450 family |
| glycine biosynthesis | 6.41E-05 | plantCyc |
| Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family | 0.000377445 | kinase family |
| secologanin and strictosidine biosynthesis | 0.001100637 | plantCyc |
| mitochondrion | 0.001387125 | GO:0005739 |
| Transcription_related, Transcription factor: MYB | 0.003190831 | TF family |
| Biosynthesis of amino acids | 0.00340109 | KEGG pathway |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 0.012286375 | GO:0016705 |
| Protein processing in endoplasmic reticulum | 0.013125916 | KEGG pathway |
| monooxygenase activity | 0.013552832 | GO:0004497 |
| vacuolar membrane | 0.014345146 | GO:0005774 |
| catalytic activity | 0.031097374 | GO:0003824 |
| metabolic process | 0.033538462 | GO:0008152 |
| protein kinase activity | 0.035980015 | GO:0004672 |
| iron ion binding | 0.042661879 | GO:0005506 |
| heme binding | 0.04663512 | GO:0020037 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000813 | AT1G06180 (1.00E-36) | ATMYB13|myb domain protein 13 |
| CRO_T003361 | AT2G45570 (2.00E-125) | CYP76C2|cytochrome P450, family 76, subfamily C, polypeptide 2 |
| CRO_T005214 | AT1G17860 (4.00E-33) | Kunitz family trypsin and protease inhibitor protein |
| CRO_T008118 | AT1G80600 (3.00E-23) | TUP5|TUMOR PRONE 5; WIN1|HOPW1-1-interacting 1 |
| CRO_T012125 | AT1G08630 (1.00E-135) | THA1|threonine aldolase 1 |
| CRO_T018139 | - | - |
| CRO_T026668 | AT3G59410 (0) | ATGCN2|GENERAL CONTROL NON-REPRESSIBLE 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000020 | I-kappaB phosphorylation zinc II ion transport IkappaB kinase activity Cytochrome_P450, Cytochrome P450: CYP76C Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase secologanin and strictosidine biosynthesis glucose import glucose transmembrane transport proton transport sugar:proton symporter activity glucose transmembrane transporter activity | details |
| CFinderADM000441 | Protein processing in endoplasmic reticulum ribonuclease inhibitor activity 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity oxaloacetate decarboxylase activity THO complex part of transcription export complex production of ta-siRNAs involved in RNA interference regulation of RNA metabolic process mRNA export from nucleus Protein_kinases_phosphatases, PPC:4.1.1: MAP3K receptor signaling protein serine/threonine kinase activity Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family signal transduction by protein phosphorylation negative regulation of catalytic activity Spliceosome plant-type cell wall methyltransferase activity serine-type endopeptidase activity Ubiquitin_Proteasome_system, E3 adaptor: DWD Golgi apparatus methylation kinase activity ATP binding plasmodesma protein kinase activity proteolysis phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |