CFinderADM000532's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Sphingolipid metabolism | 2.34E-10 | KEGG pathway |
| pyridoxal phosphate binding | 7.66E-07 | GO:0030170 |
| serine C-palmitoyltransferase activity | 3.45E-06 | GO:0004758 |
| sphingolipid catabolic process | 5.13E-06 | GO:0030149 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 6.60E-06 | cazy family |
| ceramide degradation | 1.37E-05 | plantCyc |
| carboxy-lyase activity | 2.15E-05 | GO:0016831 |
| carboxylic acid metabolic process | 2.39E-05 | GO:0019752 |
| sucrose alpha-glucosidase activity | 3.79E-05 | GO:0004575 |
| sucrose metabolic process | 4.44E-05 | GO:0005985 |
| sphingolipid biosynthesis (plants) | 7.54E-05 | plantCyc |
| Galactose metabolism | 0.000121868 | KEGG pathway |
| biosynthetic process | 0.000439142 | GO:0009058 |
| vacuole | 0.007206881 | GO:0005773 |
| endoplasmic reticulum | 0.013092394 | GO:0005783 |
| hydrolase activity | 0.013499463 | GO:0016787 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T010285 | AT3G48780 (0) | ATSPT1|SERINE PALMITOYLTRANSFERASE 1 |
| CRO_T017961 | AT1G29840 (4.00E-37) | alpha/beta-Hydrolases superfamily protein |
| CRO_T018479 | AT4G13540 (3.00E-09) | unknown protein |
| CRO_T027179 | AT1G12240 (0) | FRUCT4|fructosidase 4; VAC-INV|VACUOLAR INVERTASE; VI2|vacuolar invertase 2 |
| CRO_T033206 | AT3G17760 (2.00E-23) | GAD5|glutamate decarboxylase 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000292 | nucleoside metabolic process apigeninidin 5-O-glucoside biosynthesis luteolinidin 5-O-glucoside biosynthesis integral component of membrane histidinol dehydrogenase activity L-histidine biosynthesis hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc histidine biosynthetic process sucrose metabolic process catalytic activity sucrose alpha-glucosidase activity Calcium signaling pathway Galactose metabolism cell wall organization or biogenesis pollen development ubiquitin protein ligase binding O-acetyltransferase activity Ubiquitin_Proteasome_system, E2: UBC ubiquitin-dependent protein catabolic process quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity NAD binding Biosynthesis of amino acids Ubiquitin mediated proteolysis flavonoid glucuronidation formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: MYB flavonoid biosynthetic process ubiquitin protein ligase activity protein ubiquitination vacuole | details |
| CFinderADM000745 | nucleoside metabolic process dUDP biosynthetic process dTTP biosynthetic process dTDP biosynthetic process catalytic activity thymidylate kinase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc uridylate kinase activity sucrose metabolic process sucrose alpha-glucosidase activity pyrimidine deoxyribonucleotide phosphorylation pyrimidine deoxyribonucleotides de novo biosynthesis II superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) pyrimidine deoxyribonucleotides de novo biosynthesis I cytokinin-O-glucosides biosynthesis Galactose metabolism Pyrimidine metabolism flavonoid biosynthetic process flavonoid glucuronidation quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc vacuole intracellular membrane-bounded organelle | details |
| CFinderADM001274 | alcohol metabolic process long-chain-alcohol oxidase activity growth factor activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc sucrose alpha-glucosidase activity cell proliferation sucrose metabolic process Galactose metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: MYB flavin adenine dinucleotide binding vacuole extracellular region intracellular membrane-bounded organelle integral component of membrane | details |
| CFinderADM002032 | serine C-palmitoyltransferase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc sphingolipid biosynthesis (plants) sucrose alpha-glucosidase activity Sphingolipid metabolism sucrose metabolic process Galactose metabolism biosynthetic process response to stress integral component of membrane formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Transcription_related, Transcription factor: MYB vacuole 2-alkenal reductase [NAD(P)] activity pyridoxal phosphate binding protein kinase activity hydrolase activity | details |
Expression profiles
 Show details about module gene expression profiling |