CFinderADM000543's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| all-trans-retinol 13,14-reductase activity | 7.52E-06 | GO:0051786 |
| aspartic endopeptidase activity, intramembrane cleaving | 1.25E-05 | GO:0042500 |
| Golgi-associated vesicle membrane | 2.08E-05 | GO:0030660 |
| integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.08E-05 | GO:0071458 |
| integral component of lumenal side of endoplasmic reticulum membrane | 2.08E-05 | GO:0071556 |
| retinol metabolic process | 2.81E-05 | GO:0042572 |
| lysosomal membrane | 3.27E-05 | GO:0005765 |
| membrane protein proteolysis | 4.68E-05 | GO:0033619 |
| trans-lycopene biosynthesis II (plants) | 4.69E-05 | plantCyc |
| organelle organization | 6.54E-05 | GO:0006996 |
| developmental process | 6.54E-05 | GO:0032502 |
| signal peptide processing | 0.000160004 | GO:0006465 |
| response to UV-B | 0.000160004 | GO:0010224 |
| pollen germination | 0.000160004 | GO:0009846 |
| amino acid binding | 0.00050984 | GO:0016597 |
| isomerase activity | 0.00050984 | GO:0016853 |
| cell | 0.000870434 | GO:0005623 |
| pollen development | 0.000999392 | GO:0009555 |
| single-organism cellular process | 0.001162454 | GO:0044763 |
| chloroplast envelope | 0.008867102 | GO:0009941 |
| metabolic process | 0.022092084 | GO:0008152 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002270 | AT1G01650 (2.00E-20) | ATSPPL4|SIGNAL PEPTIDE PEPTIDASE-LIKE 4 |
| CRO_T003535 | AT2G39570 (2.00E-123) | ACR9|ACT domain repeats 9 |
| CRO_T013707 | AT1G57770 (0) | FAD/NAD(P)-binding oxidoreductase family protein |
| CRO_T017948 | AT1G64500 (5.00E-82) | Glutaredoxin family protein |
| CRO_T020807 | AT3G45890 (0) | RUS1|ROOT UVB SENSITIVE 1; WXR3|WEAK AUXIN RESPONSE 3 |
| CRO_T027562 | AT3G48940 (0.000006) | Remorin family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001154 | phosphatidylethanolamine binding developmental process negative regulation of flower development response to UV-B vegetative to reproductive phase transition of meristem amino acid transmembrane transport amino acid transmembrane transporter activity ligase activity protein ubiquitination ubiquitin-protein transferase activity Ubiquitin_Proteasome_system, E3: U-box cytoplasm | details |
Expression profiles
 Show details about module gene expression profiling |