CFinderADM000563's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| delta4-3-oxosteroid 5beta-reductase activity | 3.62E-05 | GO:0047787 |
| 3-oxo-5-beta-steroid 4-dehydrogenase activity | 3.62E-05 | GO:0047568 |
| gibberellin biosynthesis III (early C-13 hydroxylation) | 0.00010327 | plantCyc |
| 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 0.00013271 | GO:0003854 |
| Diterpenoid biosynthesis | 0.000149594 | KEGG pathway |
| intracellular organelle | 0.000200961 | GO:0043229 |
| Transcription_related, Transcription factor: HSF | 0.000221014 | TF family |
| coenzyme binding | 0.001403514 | GO:0050662 |
| Transcription_related, Transcription factor: C2H2 | 0.001457447 | TF family |
| methyltransferase activity | 0.005636849 | GO:0008168 |
| sequence-specific DNA binding | 0.012533106 | GO:0043565 |
| transcription factor activity, sequence-specific DNA binding | 0.023380973 | GO:0003700 |
| methylation | 0.025214638 | GO:0032259 |
| oxidoreductase activity | 0.036156151 | GO:0016491 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000149 | AT2G23740 (0) | SUVR5|SU(VAR)3-9-RELATED protein 5 |
| CRO_T001994 | AT1G52810 (7.00E-25) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T017502 | AT4G24220 (1.00E-151) | VEP1|VEIN PATTERNING 1 |
| CRO_T018109 | AT2G41690 (2.00E-42) | AT-HSFB3|heat shock transcription factor B3; HSFB3|HEAT SHOCK TRANSCRIPTION FACTOR B3 |
| CRO_T025622 | AT1G15550 (2.00E-28) | ATGA3OX1|GIBBERELLIN 3 BETA-HYDROXYLASE 1; GA3OX1|gibberellin 3-oxidase 1; GA4|GA REQUIRING 4 |
| CRO_T030030 | AT1G22470 (3.00E-05) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000660 | Transcription_related, Transcription regulator: SOH1 tryptophan catabolic process to kynurenine formaldehyde oxidation II (glutathione-dependent) L-glutamate degradation I ternatin C3 biosynthesis glutamate dehydrogenase [NAD(P)+] activity arylformamidase activity delta4-3-oxosteroid 5beta-reductase activity 3-oxo-5-beta-steroid 4-dehydrogenase activity secondary metabolic process L-alanine degradation II (to D-lactate) 3-beta-hydroxy-delta5-steroid dehydrogenase activity acetaldehyde biosynthesis I cellulose biosynthesis pyruvate fermentation to ethanol II Transcription_related, Transcription factor: HSF cobalt ion binding formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) cellular amino acid metabolic process Transcription_related, Transcription factor: WRKY intracellular organelle plastoglobule oxidoreductase activity serine-type carboxypeptidase activity Transcription_related, Transcription factor: C2H2 coenzyme binding transferase activity, transferring acyl groups other than amino-acyl groups ATPase activity proteolysis involved in cellular protein catabolic process oxidation-reduction process vesicle-mediated transport signal transduction | details |
| CFinderADM000810 | 3-oxo-5-beta-steroid 4-dehydrogenase activity delta4-3-oxosteroid 5beta-reductase activity Transcription_related, Transcription factor: HSF 3-beta-hydroxy-delta5-steroid dehydrogenase activity coenzyme binding vesicle-mediated transport Protein processing in endoplasmic reticulum intracellular protein transport GTP binding sequence-specific DNA binding Golgi apparatus endoplasmic reticulum transcription factor activity, sequence-specific DNA binding | details |
| CFinderADM001433 | 3-oxo-5-beta-steroid 4-dehydrogenase activity delta4-3-oxosteroid 5beta-reductase activity glutathione-disulfide reductase activity glutathione-glutaredoxin redox reactions glutathione-peroxide redox reactions 3-beta-hydroxy-delta5-steroid dehydrogenase activity cellulose biosynthesis Transcription_related, Transcription factor: HSF formation of glycosidic bonds, GlycosylTransferases: GTnc Glutathione metabolism coenzyme binding NADP binding membrane Peroxisome glutathione metabolic process cellular oxidant detoxification cell redox homeostasis oxidation-reduction process flavin adenine dinucleotide binding sequence-specific DNA binding transferase activity transcription factor activity, sequence-specific DNA binding regulation of transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |