CFinderADM000619's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| regulation of cell adhesion | 1.41E-06 | GO:0030155 |
| viral nucleocapsid | 0.000505784 | GO:0019013 |
| intracellular ribonucleoprotein complex | 0.000505784 | GO:0030529 |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.002704598 | kinase family |
| Transcription_related, Transcription factor: C2H2 | 0.002704598 | TF family |
| ubiquitin protein ligase activity | 0.004872457 | GO:0061630 |
| endoplasmic reticulum | 0.008728263 | GO:0005783 |
| kinase activity | 0.009249165 | GO:0016301 |
| Ubiquitin_Proteasome_system, E3: RING | 0.019155007 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009193 | AT5G10780 (2.00E-64) | |
| CRO_T018514 | - | - |
| CRO_T024239 | AT4G18372 (7.00E-34) | Small nuclear ribonucleoprotein family protein |
| CRO_T024618 | AT5G01160 (1.00E-38) | RING/U-box superfamily protein |
| CRO_T030916 | AT5G39390 (4.00E-79) | Leucine-rich repeat protein kinase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000917 | Transcription_related, Transcription factor: OFP | details |
| CFinderADM001752 | dioxygenase activity Two-component system Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3-box linoleate biosynthesis I (plants) L-ascorbate peroxidase activity asparagine synthase (glutamine-hydrolyzing) activity L-ascorbate degradation V phospholipid desaturation ascorbate glutathione cycle asparagine biosynthetic process Ascorbate and aldarate metabolism integral component of membrane oxidation-reduction process glutamine metabolic process glycolipid desaturation vindoline and vinblastine biosynthesis protein homodimerization activity metal ion binding lipid metabolic process response to oxidative stress cellular oxidant detoxification endoplasmic reticulum heme binding | details |
Expression profiles
 Show details about module gene expression profiling |