CFinderADM000676's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| xylan biosynthesis | 6.86E-05 | plantCyc |
| cellulose biosynthesis | 9.01E-05 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.000344152 | cazy family |
| cellulose synthase (UDP-forming) activity | 0.000690899 | GO:0016760 |
| phosphoprotein phosphatase activity | 0.000878284 | GO:0004721 |
| cellulose biosynthetic process | 0.001325043 | GO:0030244 |
| protein dephosphorylation | 0.003300602 | GO:0006470 |
| cell wall organization | 0.003926485 | GO:0071555 |
| transporter activity | 0.003992406 | GO:0005215 |
| transport | 0.007759952 | GO:0006810 |
| Ubiquitin_Proteasome_system, E3: RING | 0.013111979 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001419 | AT1G34320 (4.00E-71) | Protein of unknown function (DUF668) |
| CRO_T002003 | AT3G06110 (3.00E-17) | ATMKP2|ARABIDOPSIS MAPK PHOSPHATASE 2; DSPTP1B|DUAL-SPECIFICITY PROTEIN PHOSPHATASE 1B; MKP2|MAPK phosphatase 2 |
| CRO_T020338 | AT1G55850 (3.00E-114) | CSLE1|cellulose synthase like E1 |
| CRO_T028583 | AT5G60710 (0) | Zinc finger (C3HC4-type RING finger) family protein |
| CRO_T029419 | AT4G18210 (3.00E-99) | ATPUP10|purine permease 10 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000201 | receptor-mediated endocytosis regulation of anion channel activity detection of bacterium defense response by callose deposition in cell wall motile cilium trans, trans-farnesyl diphosphate biosynthesis geranylgeranyl diphosphate biosynthesis polyisoprenoid biosynthesis superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) long-chain fatty acid activation transferase activity, transferring alkyl or aryl (other than methyl) groups oleate biosynthesis I (plants) cutin biosynthesis stearate biosynthesis II (bacteria and plants) sporopollenin precursors biosynthesis phosphatidylcholine acyl editing defense response to bacterium suberin monomers biosynthesis palmitate biosynthesis II (bacteria and plants) Fatty acid metabolism Terpenoid backbone biosynthesis Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII MAPK signaling pathway - plant endosome transport transporter activity protein kinase activity catalytic activity metabolic process protein phosphorylation | details |
| CFinderADM000677 | glutathione-glutaredoxin redox reactions glutathione-disulfide reductase activity glutathione-peroxide redox reactions cellulose biosynthesis Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase formation of glycosidic bonds, GlycosylTransferases: GTnc Glutathione metabolism Plant-pathogen interaction NADP binding phosphoprotein phosphatase activity glutathione metabolic process protein dephosphorylation cellular oxidant detoxification cell redox homeostasis flavin adenine dinucleotide binding Ubiquitin_Proteasome_system, E3: RING transferase activity protein serine/threonine kinase activity | details |
| CFinderADM001634 | Protein_kinases_phosphatases, PPC:2.1.5: ATN1 Like Family membrane Ubiquitin_Proteasome_system, E3: RING protein phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |