CFinderADM000684's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| response to chemical | 3.19E-05 | GO:0042221 |
| plasmodesmata-mediated intercellular transport | 3.19E-05 | GO:0010497 |
| reproductive structure development | 7.78E-05 | GO:0048608 |
| single organism reproductive process | 0.000144212 | GO:0044702 |
| post-embryonic development | 0.000195805 | GO:0009791 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.000470747 | GO:0008757 |
| single-organism cellular process | 0.000793522 | GO:0044763 |
| regulation of cellular process | 0.001101195 | GO:0050794 |
| intracellular part | 0.003578834 | GO:0044424 |
| endosome | 0.003578834 | GO:0005768 |
| vacuolar membrane | 0.003578834 | GO:0005774 |
| trans-Golgi network | 0.003578834 | GO:0005802 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.004683771 | ubs family |
| methylation | 0.006370261 | GO:0032259 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006772 | AT1G58848 (2.00E-90) | Disease resistance protein (CC-NBS-LRR class) family |
| CRO_T007517 | AT2G40280 (0) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T013848 | - | - |
| CRO_T026802 | - | - |
| CRO_T033491 | AT1G19530 (9.00E-07) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000206 | S-adenosylmethionine-dependent methyltransferase activity methylation trans-Golgi network vacuolar membrane endosome | details |
| CFinderADM000675 | NAD binding quinone binding S-adenosylmethionine-dependent methyltransferase activity NADH dehydrogenase (ubiquinone) activity endosome vacuolar membrane trans-Golgi network Oxidative phosphorylation methylation | details |
| CFinderADM000685 | pyruvate dehydrogenase (acetyl-transferring) activity pyruvate decarboxylation to acetyl CoA response to chemical plasmodesmata-mediated intercellular transport acetyl-CoA biosynthetic process from pyruvate reproductive structure development single organism reproductive process post-embryonic development intracellular part Basal transcription factors single-organism cellular process regulation of cellular process Ubiquitin_Proteasome_system, E3 adaptor: DWD Carbon metabolism | details |
| CFinderADM001988 | DNA replication-independent nucleosome assembly transketolase activity nucleosome binding pyruvate dehydrogenase (acetyl-transferring) activity pyruvate decarboxylation to acetyl CoA pollen tube development glycolytic process S-adenosylmethionine-dependent methyltransferase activity methylation endosome vacuolar membrane trans-Golgi network Carbon metabolism chloroplast envelope zinc ion binding | details |
Expression profiles
 Show details about module gene expression profiling |