CFinderADM000705's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP704A | 1.03E-05 | CYP450 family |
| non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 | 4.69E-05 | cazy family |
| Protein_kinases_phosphatases, PPC:1.7.1: S Domain Kinase (Type 1) | 5.17E-05 | kinase family |
| NF-kappa B signaling pathway | 0.000351523 | KEGG pathway |
| SNARE interactions in vesicular transport | 0.000351523 | KEGG pathway |
| peptidyl-tyrosine phosphorylation | 0.000615538 | GO:0018108 |
| membrane | 0.001456208 | GO:0016020 |
| non-membrane spanning protein tyrosine kinase activity | 0.001656182 | GO:0004715 |
| carbohydrate binding | 0.006756073 | GO:0030246 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.007597274 | cazy family |
| carbohydrate metabolic process | 0.009572693 | GO:0005975 |
| catalytic activity | 0.026046922 | GO:0003824 |
| oxidoreductase activity | 0.040912249 | GO:0016491 |
| plasma membrane | 0.044287454 | GO:0005886 |
| protein serine/threonine kinase activity | 0.046221236 | GO:0004674 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000461 | AT1G09880 (0) | Rhamnogalacturonate lyase family protein |
| CRO_T024907 | AT4G14290 (4.00E-159) | alpha/beta-Hydrolases superfamily protein |
| CRO_T028046 | AT2G45510 (2.00E-134) | CYP704A2|cytochrome P450, family 704, subfamily A, polypeptide 2 |
| CRO_T029413 | AT3G58170 (2.00E-23) | ATBS14A|BET1P/SFT1P-LIKE PROTEIN 14A |
| CRO_T030713 | AT1G16670 (3.00E-130) | Protein kinase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000649 | poly(A) RNA binding RNA processing RNA degradation ATP-dependent RNA helicase activity cytosolic large ribosomal subunit Ribosome translation structural constituent of ribosome | details |
| CFinderADM001207 | Group II intron splicing cytochrome complex assembly iron-sulfur cluster assembly SNARE interactions in vesicular transport chloroplast organization iron-sulfur cluster binding Transcription_related, Transcription factor: C2H2 RNA binding iron ion binding chloroplast stroma | details |
Expression profiles
 Show details about module gene expression profiling |