CFinderADM000778's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| peptidyl-proline hydroxylation | 1.38E-05 | GO:0019511 |
| procollagen-proline 4-dioxygenase activity | 4.83E-05 | GO:0004656 |
| Arginine and proline metabolism | 0.000109146 | KEGG pathway |
| L-ascorbic acid binding | 0.000241004 | GO:0031418 |
| nucleosome assembly | 0.000265062 | GO:0006334 |
| nucleosome | 0.000344152 | GO:0000786 |
| protein catabolic process | 0.000536419 | GO:0030163 |
| aspartic-type endopeptidase activity | 0.00082368 | GO:0004190 |
| iron ion binding | 0.014411934 | GO:0005506 |
| proteolysis | 0.014997292 | GO:0006508 |
| DNA binding | 0.04281043 | GO:0003677 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004897 | AT2G17720 (4.00E-19) | P4H5|prolyl 4-hydroxylase 5 |
| CRO_T005779 | AT1G80180 (2.00E-12) | unknown protein |
| CRO_T009106 | AT1G51580 (4.00E-07) | RNA-binding KH domain-containing protein |
| CRO_T021845 | AT2G42980 (8.00E-27) | Eukaryotic aspartyl protease family protein |
| CRO_T028224 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM002295 | peptidyl-proline hydroxylation Toll and Imd signaling pathway protein K63-linked ubiquitination postreplication repair Nicotinate and nicotinamide metabolism procollagen-proline 4-dioxygenase activity NAD/NADH phosphorylation and dephosphorylation Arginine and proline metabolism L-ascorbic acid binding Ubiquitin_Proteasome_system, E2: UBC ubiquitin protein ligase binding ligase activity ubiquitin protein ligase activity formation of glycosidic bonds, GlycosylTransferases: GTnc iron ion binding | details |
Expression profiles
 Show details about module gene expression profiling |