CFinderADM000806's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| 2-alkenal reductase [NAD(P)] activity | 1.67E-07 | GO:0032440 |
| oxidation-reduction process | 7.39E-06 | GO:0055114 |
| homogalacturonan degradation | 0.000286676 | plantCyc |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.001103918 | kinase family |
| RNA transport | 0.002712166 | KEGG pathway |
| phosphorylation | 0.012077389 | GO:0016310 |
| kinase activity | 0.012285946 | GO:0016301 |
| integral component of membrane | 0.018006186 | GO:0016021 |
| oxidoreductase activity | 0.032904698 | GO:0016491 |
| protein phosphorylation | 0.033955982 | GO:0006468 |
| protein serine/threonine kinase activity | 0.0356876 | GO:0004674 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005077 | AT1G33600 (1.00E-140) | Leucine-rich repeat (LRR) family protein |
| CRO_T006168 | AT4G24880 (1.00E-155) | unknown protein |
| CRO_T007984 | AT1G60690 (3.00E-108) | NAD(P)-linked oxidoreductase superfamily protein |
| CRO_T019875 | AT1G49510 (5.00E-64) | emb1273|embryo defective 1273 |
| CRO_T020908 | AT1G34110 (0) | Leucine-rich receptor-like protein kinase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001145 | 2-alkenal reductase [NAD(P)] activity Fatty acid biosynthesis palmitoyl-[acyl-carrier-protein] hydrolase activity oleoyl-[acyl-carrier-protein] hydrolase activity myristoyl-[acyl-carrier-protein] hydrolase activity oleate biosynthesis I (plants) homogalacturonan degradation Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII oxidation-reduction process fatty acid biosynthetic process kinase activity phosphorylation integral component of membrane protein serine/threonine kinase activity protein phosphorylation | details |
| CFinderADM002014 | Fatty acid biosynthesis DUBm complex transcription export complex 2 oleoyl-[acyl-carrier-protein] hydrolase activity palmitoyl-[acyl-carrier-protein] hydrolase activity myristoyl-[acyl-carrier-protein] hydrolase activity SAGA complex oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor histone deubiquitination transcription elongation from RNA polymerase II promoter mRNA export from nucleus 2-oxoglutarate decarboxylation to succinyl-CoA glycine cleavage pyruvate decarboxylation to acetyl CoA 2-oxoisovalerate decarboxylation to isobutanoyl-CoA transcription coactivator activity oleate biosynthesis I (plants) nuclear pore cell Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII positive regulation of transcription, DNA-templated protein transport fatty acid biosynthetic process cell redox homeostasis 2-alkenal reductase [NAD(P)] activity flavin adenine dinucleotide binding oxidation-reduction process Carbon metabolism integral component of membrane protein serine/threonine kinase activity protein phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |