CFinderADM000809's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein dimerization activity | 8.70E-07 | GO:0046983 |
| superpathway of scopolin and esculin biosynthesis | 0.000111611 | plantCyc |
| O-methyltransferase activity | 0.000253012 | GO:0008171 |
| zinc ion binding | 0.000303404 | GO:0008270 |
| phenylpropanoids methylation (ice plant) | 0.000891709 | plantCyc |
| suberin monomers biosynthesis | 0.000891709 | plantCyc |
| Phenylpropanoid biosynthesis | 0.003320831 | KEGG pathway |
| transport | 0.00865751 | GO:0006810 |
| methylation | 0.00865751 | GO:0032259 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001504 | AT5G39350 (0) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T003675 | AT3G17100 (2.00E-31) | AIF3|ATBS1 Interacting Factor 3 |
| CRO_T012223 | AT1G17630 (4.00E-59) | Pentatricopeptide repeat (PPR-like) superfamily protein |
| CRO_T025454 | AT3G02330 (2.00E-147) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T026603 | AT3G15930 (6.00E-89) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T031219 | AT5G54160 (2.00E-106) | ATOMT1|O-methyltransferase 1; COMT1|caffeate O-methyltransferase 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000863 | outer membrane zinc ion binding Prion diseases Ubiquitin_Proteasome_system, E2: UBC ligase activity protein dimerization activity Protein processing in endoplasmic reticulum | details |
| CFinderADM001212 | Vasopressin-regulated water reabsorption motile cilium dynein complex 90S preribosome oxalate metabolic process microtubule-based process maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) translational elongation oxalate decarboxylase activity translation elongation factor activity small-subunit processome GTPase activity nucleolus cell wall transport intracellular GTP binding | details |
| CFinderADM001244 | (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity Elongator holoenzyme complex integral component of chloroplast outer membrane protein tetramerization 'de novo' AMP biosynthetic process amidase activity 'de novo' IMP biosynthetic process inosine-5'-phosphate biosynthesis II superpathway of scopolin and esculin biosynthesis carbon-nitrogen ligase activity, with glutamine as amido-N-donor O-methyltransferase activity adenosine ribonucleotides de novo biosynthesis Arginine and proline metabolism phenylpropanoids methylation (ice plant) suberin monomers biosynthesis Transcription_related, Transcription factor: ERF protein dimerization activity Phenylpropanoid biosynthesis Purine metabolism methylation transcription factor activity, sequence-specific DNA binding transcription, DNA-templated nucleic acid binding | details |
Expression profiles
 Show details about module gene expression profiling |