CFinderADM000811's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Fatty acid elongation | 0.000187849 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase | 0.000221764 | kinase family |
| Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase | 0.000221764 | kinase family |
| nucleolar ribonuclease P complex | 0.000348854 | GO:0005655 |
| L-glutamine degradation I | 0.000741737 | plantCyc |
| response to endoplasmic reticulum stress | 0.000799513 | GO:0034976 |
| cation transport | 0.000799513 | GO:0006812 |
| gene silencing by RNA | 0.000799513 | GO:0031047 |
| ribonuclease P activity | 0.001771143 | GO:0004526 |
| protein disulfide isomerase activity | 0.001821582 | GO:0003756 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.002020408 | cazy family |
| very long chain fatty acid biosynthesis I | 0.003175702 | plantCyc |
| very long chain fatty acid biosynthesis II | 0.003511452 | plantCyc |
| non-membrane spanning protein tyrosine kinase activity | 0.004131584 | GO:0004715 |
| RNA phosphodiester bond hydrolysis, endonucleolytic | 0.004474513 | GO:0090502 |
| peptidyl-tyrosine phosphorylation | 0.006798274 | GO:0018108 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 0.009111483 | GO:0016747 |
| proteasome-mediated ubiquitin-dependent protein catabolic process | 0.009850209 | GO:0043161 |
| Transcription_related, Transcription factor: bHLH | 0.009967746 | TF family |
| fatty acid biosynthetic process | 0.010144944 | GO:0006633 |
| response to abscisic acid | 0.010144944 | GO:0009737 |
| cell redox homeostasis | 0.011546063 | GO:0045454 |
| ubiquitin protein ligase activity | 0.02062043 | GO:0061630 |
| methyltransferase activity | 0.02062043 | GO:0008168 |
| protein folding | 0.020668281 | GO:0006457 |
| protein dimerization activity | 0.023000808 | GO:0046983 |
| protein ubiquitination | 0.02435457 | GO:0016567 |
| methylation | 0.035206939 | GO:0032259 |
| endoplasmic reticulum | 0.035947785 | GO:0005783 |
| integral component of membrane | 0.035947785 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000034 | AT1G04360 (1.00E-10) | RING/U-box superfamily protein |
| CRO_T008624 | AT5G02940 (0) | Protein of unknown function (DUF1012) |
| CRO_T009765 | AT4G18950 (1.00E-176) | Integrin-linked protein kinase family |
| CRO_T010262 | AT4G17880 (2.00E-26) | MYC4|Basic helix-loop-helix (bHLH) DNA-binding family protein |
| CRO_T012009 | AT1G01120 (0) | KCS1|3-ketoacyl-CoA synthase 1 |
| CRO_T013847 | AT1G30845 (1.00E-16) | unknown protein |
| CRO_T021428 | AT3G12550 (8.00E-138) | FDM3|factor of DNA methylation 3 |
| CRO_T026116 | AT2G26680 (2.00E-118) | |
| CRO_T028622 | AT3G55950 (3.00E-64) | CCR3|CRINKLY4 related 3 |
| CRO_T031570 | AT3G03860 (9.00E-71) | APRL5|APR-like 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000753 | phytol metabolic process chlorophyll a degradation II Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase ABC transporters plastoglobule Transcription_related, Transcription factor: G2-like diacylglycerol O-acyltransferase activity diacylglycerol and triacylglycerol biosynthesis integral component of membrane proteasome-mediated ubiquitin-dependent protein catabolic process drug transmembrane transport drug transmembrane transporter activity antiporter activity methyltransferase activity ATPase activity, coupled to transmembrane movement of substances 2-alkenal reductase [NAD(P)] activity ubiquitin protein ligase activity protein ubiquitination methylation kinase activity Ubiquitin_Proteasome_system, E3: RING transmembrane transport | details |
| CFinderADM001117 | Human papillomavirus infection phytol metabolic process response to microbial phytotoxin salicylic acid biosynthetic process regulation of hydrogen peroxide metabolic process Transcription_related, Transcription factor: NF-X1 response to light intensity chlorophyll a degradation II Protein_kinases_phosphatases, PPC:1.2.1: Receptor Like Cytoplasmic Kinase VIII plant-type hypersensitive response diacylglycerol O-acyltransferase activity plastoglobule adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 diacylglycerol and triacylglycerol biosynthesis Plant-pathogen interaction defense response to bacterium response to salt stress proteasome-mediated ubiquitin-dependent protein catabolic process methylation methyltransferase activity ubiquitin protein ligase activity Ubiquitin_Proteasome_system, E3: RING transcription factor activity, sequence-specific DNA binding regulation of transcription, DNA-templated protein phosphorylation | details |
| CFinderADM001366 | antiporter activity drug transmembrane transporter activity drug transmembrane transport hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc alpha-L-fucosidase activity Other glycan degradation Fatty acid elongation integral component of membrane transferase activity, transferring acyl groups other than amino-acyl groups very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II fatty acid biosynthetic process vacuole methyltransferase activity methylation carbohydrate metabolic process | details |
| CFinderADM002028 | Protein_kinases_phosphatases, PPC:4.1.3: MAP2K MAP kinase kinase activity receptor signaling protein serine/threonine kinase activity cell division MAPK cascade microtubule MAPK signaling pathway - plant embryo development ending in seed dormancy protein binding methyltransferase activity ubiquitin-protein transferase activity protein ubiquitination methylation | details |
| CFinderADM002193 | putrescine biosynthesis II arginine decarboxylase activity arginine catabolic process cellular protein localization Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase spermidine biosynthetic process Arginine and proline metabolism Insulin signaling pathway adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 exocyst exocytosis response to salt stress signal transduction methyltransferase activity methylation protein serine/threonine kinase activity protein phosphorylation | details |
| CFinderADM002268 | coumarin biosynthesis (via 2-coumarate) Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase glycosyl compound metabolic process acetylglucosaminyltransferase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc beta-glucosidase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Starch and sucrose metabolism carbohydrate metabolic process protein serine/threonine kinase activity protein phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |