CFinderADM000828's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| condensed chromosome outer kinetochore | 1.40E-05 | GO:0000940 |
| Transcription_related, Transcription factor: Whirly | 2.07E-05 | TF family |
| embryonic meristem development | 2.39E-05 | GO:0048508 |
| radial axis specification | 2.39E-05 | GO:0009945 |
| nucleotide phosphatase activity, acting on free nucleotides | 2.58E-05 | GO:0098519 |
| innate immune response | 4.77E-05 | GO:0045087 |
| longitudinal axis specification | 4.77E-05 | GO:0009942 |
| anther development | 4.77E-05 | GO:0048653 |
| spindle microtubule | 8.36E-05 | GO:0005876 |
| chromosome segregation | 9.54E-05 | GO:0007059 |
| Protein_kinases_phosphatases, PPC:1.12.2: Leucine Rich Repeat Kinase II & X | 0.000156763 | kinase family |
| pyrimidine deoxyribonucleotides de novo biosynthesis I | 0.000250536 | plantCyc |
| pollen germination | 0.000272098 | GO:0009846 |
| protein serine/threonine kinase activity | 0.000344697 | GO:0004674 |
| ATP binding | 0.000344697 | GO:0005524 |
| defense response to fungus | 0.000593948 | GO:0050832 |
| pyrimidine ribonucleotides interconversion | 0.000648867 | plantCyc |
| Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | 0.000935733 | kinase family |
| non-membrane spanning protein tyrosine kinase activity | 0.000992413 | GO:0004715 |
| cell division | 0.001356018 | GO:0051301 |
| positive regulation of transcription, DNA-templated | 0.001356018 | GO:0045893 |
| peptidyl-tyrosine phosphorylation | 0.001356018 | GO:0018108 |
| microtubule binding | 0.002804341 | GO:0008017 |
| dephosphorylation | 0.003889207 | GO:0016311 |
| plastid | 0.005189405 | GO:0009536 |
| Purine metabolism | 0.005349055 | KEGG pathway |
| sequence-specific DNA binding | 0.01659655 | GO:0043565 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.017567223 | cazy family |
| transcription factor activity, sequence-specific DNA binding | 0.027434258 | GO:0003700 |
| RNA binding | 0.027904406 | GO:0003723 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000262 | AT3G02130 (0) | CLI1|clv3 peptide insensitive 1; RPK2|receptor-like protein kinase 2; TOAD2|TOADSTOOL 2 |
| CRO_T005897 | AT2G02740 (4.00E-72) | ATWHY3|A. THALIANA WHIRLY 3; PTAC11|PLASTID TRANSCRIPTIONALLY ACTIVE11; WHY3|WHIRLY 3 |
| CRO_T008170 | AT5G18610 (1.00E-77) | Protein kinase superfamily protein |
| CRO_T017421 | AT5G66005 (8.00E-54) | Expressed protein |
| CRO_T026940 | AT2G29760 (3.00E-80) | OTP81|ORGANELLE TRANSCRIPT PROCESSING 81 |
| CRO_T028296 | AT5G12410 (6.00E-110) | THUMP domain-containing protein |
| CRO_T031106 | AT2G24970 (2.00E-44) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001237 | nucleotide phosphatase activity, acting on free nucleotides pyrimidine deoxyribonucleotides de novo biosynthesis I pyrimidine ribonucleotides interconversion Ubiquitin_Proteasome_system, E3: U-box dephosphorylation ligase activity Purine metabolism protein ubiquitination ubiquitin-protein transferase activity | details |
| CFinderADM001238 | nucleotide phosphatase activity, acting on free nucleotides 6-phosphogluconolactonase activity pentose phosphate pathway (oxidative branch) I pyrimidine deoxyribonucleotides de novo biosynthesis I pentose-phosphate shunt pyrimidine ribonucleotides interconversion dephosphorylation Purine metabolism carbohydrate metabolic process Carbon metabolism | details |
| CFinderADM001878 | nucleotide phosphatase activity, acting on free nucleotides response to organic substance pyrimidine deoxyribonucleotides de novo biosynthesis I RNA splicing pyrimidine ribonucleotides interconversion response to stimulus single-organism process lipid binding dephosphorylation intracellular part Ribosome Purine metabolism Spliceosome translation RNA binding structural constituent of ribosome | details |
| CFinderADM001899 | nucleotide phosphatase activity, acting on free nucleotides RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly Transcription_related, Transcription regulator: MED6 RNA polymerase II transcriptional preinitiation complex assembly core mediator complex pyrimidine deoxyribonucleotides de novo biosynthesis I mediator complex pyrimidine ribonucleotides interconversion Transcription_related, Transcription factor: B3 regulation of transcription from RNA polymerase II promoter dephosphorylation Purine metabolism | details |
| CFinderADM001932 | alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity nucleotide phosphatase activity, acting on free nucleotides polyubiquitin binding response to cadmium ion pyrimidine deoxyribonucleotides de novo biosynthesis I pyrimidine ribonucleotides interconversion protein glycosylation N-Glycan biosynthesis S-adenosylmethionine-dependent methyltransferase activity dephosphorylation Purine metabolism endosome vacuolar membrane trans-Golgi network methylation | details |
| CFinderADM002132 | chlorophyllase activity innate immune response regulation of vesicle fusion activation of GTPase activity chlorophyll catabolic process Rab GTPase binding Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII non-membrane spanning protein tyrosine kinase activity GTPase activator activity Porphyrin and chlorophyll metabolism peptidyl-tyrosine phosphorylation fatty acid biosynthetic process intracellular protein transport endomembrane system Oxidative phosphorylation intracellular protein serine/threonine kinase activity | details |
Expression profiles
 Show details about module gene expression profiling |