CFinderADM000903's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| aerobic respiration III (alternative oxidase pathway) | 2.41E-08 | plantCyc |
| respiratory chain complex II | 1.87E-05 | GO:0045273 |
| L-asparagine degradation I | 2.63E-05 | plantCyc |
| alternative oxidase activity | 3.22E-05 | GO:0009916 |
| asparaginase activity | 3.22E-05 | GO:0004067 |
| cation transmembrane transporter activity | 5.14E-05 | GO:0008324 |
| superpathway of aspartate and asparagine biosynthesis | 0.000116449 | plantCyc |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.000181469 | cazy family |
| aerobic respiration I (cytochrome c) | 0.000492043 | plantCyc |
| cation transmembrane transport | 0.000514917 | GO:0098655 |
| xyloglucan:xyloglucosyl transferase activity | 0.000529112 | GO:0016762 |
| cell wall biogenesis | 0.000590575 | GO:0042546 |
| xyloglucan metabolic process | 0.000590575 | GO:0010411 |
| respiratory chain | 0.002663062 | GO:0070469 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 0.00466567 | GO:0004553 |
| mitochondrial inner membrane | 0.004795715 | GO:0005743 |
| cell wall organization | 0.005790871 | GO:0071555 |
| apoplast | 0.005934618 | GO:0048046 |
| cell wall | 0.014778504 | GO:0005618 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006784 | - | - |
| CRO_T012784 | AT3G22370 (3.00E-81) | AOX1A|alternative oxidase 1A; HSR3|hyper-sensitivity-related 3 |
| CRO_T014350 | AT1G47420 (1.00E-76) | SDH5|succinate dehydrogenase 5 |
| CRO_T017616 | AT1G51610 (7.00E-117) | Cation efflux family protein |
| CRO_T017988 | AT5G08100 (8.00E-105) | ASPGA1|asparaginase A1 |
| CRO_T027637 | AT5G13870 (3.00E-140) | EXGT-A4|endoxyloglucan transferase A4; XTH5|xyloglucan endotransglucosylase/hydrolase 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001739 | glycine decarboxylation via glycine cleavage system respiratory chain complex II asparaginase activity glycine cleavage complex cation transmembrane transporter activity cation transmembrane transport L-asparagine degradation I glycine cleavage superpathway of aspartate and asparagine biosynthesis photorespiration folate transformations II aerobic respiration III (alternative oxidase pathway) aerobic respiration I (cytochrome c) hydrolase activity, acting on ester bonds Carbon metabolism | details |
Expression profiles
 Show details about module gene expression profiling |