CFinderADM000913's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| AP-type membrane coat adaptor complex | 6.93E-06 | GO:0030119 |
| endosomal transport | 4.83E-05 | GO:0016197 |
| magnesium ion transmembrane transport | 0.000117114 | GO:1903830 |
| magnesium ion transport | 0.000117114 | GO:0015693 |
| magnesium ion transmembrane transporter activity | 0.000312354 | GO:0015095 |
| ubiquitin-dependent protein catabolic process | 0.001222139 | GO:0006511 |
| organic cyclic compound binding | 0.001629519 | GO:0097159 |
| heterocyclic compound binding | 0.001629519 | GO:1901363 |
| ATPase activity, coupled to transmembrane movement of substances | 0.002124434 | GO:0042626 |
| protein ubiquitination | 0.00378359 | GO:0016567 |
| Ubiquitin_Proteasome_system, E3: U-box | 0.003790822 | ubs family |
| Ubiquitin_Proteasome_system, E3: RING | 0.016288271 | ubs family |
| integral component of membrane | 0.029410104 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000553 | AT3G13430 (3.00E-21) | RING/U-box superfamily protein |
| CRO_T011547 | AT1G53270 (0) | ABCG10|ATP-binding cassette G10 |
| CRO_T011875 | AT2G21120 (2.00E-81) | Protein of unknown function (DUF803) |
| CRO_T024264 | AT3G19870 (3.00E-128) | unknown protein |
| CRO_T027038 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000713 | nucleotidase activity RIG-I-like receptor signaling pathway guanosine nucleotides degradation I guanosine nucleotides degradation II pyrimidine salvage pathway adenosine nucleotides degradation I RNA secondary structure unwinding dephosphorylation heterocyclic compound binding organic cyclic compound binding ATP-dependent RNA helicase activity Purine metabolism nucleic acid binding | details |
| CFinderADM001683 | GDP-L-fucose biosynthesis II (from L-fucose) DNA methylation on cytosine within a CHH sequence cellular response to heat GDP-L-fucose salvage fucokinase activity fucose-1-phosphate guanylyltransferase activity C-5 methylation of cytosine lysyl-tRNA aminoacylation PcG protein complex DNA (cytosine-5-)-methyltransferase activity lysine-tRNA ligase activity magnesium ion transmembrane transport magnesium ion transport Transcription_related, Transcription regulator: SET magnesium ion transmembrane transporter activity Fructose and mannose metabolism Lysine degradation Cysteine and methionine metabolism cytoplasm chromatin binding Aminoacyl-tRNA biosynthesis small GTPase mediated signal transduction Endocytosis ATP binding GTP binding phosphorylation intracellular hydrolase activity nucleic acid binding | details |
Expression profiles
 Show details about module gene expression profiling |