CFinderADM000940's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: bZIP | 0.000781621 | TF family |
| Transcription_related, Transcription factor: MYB | 0.001975095 | TF family |
| sequence-specific DNA binding | 0.018759423 | GO:0043565 |
| transcription factor activity, sequence-specific DNA binding | 0.018759423 | GO:0003700 |
| transferase activity | 0.018759423 | GO:0016740 |
| regulation of transcription, DNA-templated | 0.040459577 | GO:0006355 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003248 | AT3G10020 (2.00E-24) | unknown protein |
| CRO_T011696 | AT3G55730 (2.00E-41) | AtMYB109|myb domain protein 109 |
| CRO_T017474 | AT1G10095 (5.00E-80) | Protein prenylyltransferase superfamily protein |
| CRO_T024105 | AT4G08950 (1.00E-117) | EXO|EXORDIUM |
| CRO_T029187 | AT4G34590 (2.00E-21) | AtbZIP11|basic leucine-zipper 11; GBF6|G-box binding factor 6 |
| CRO_T031236 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000283 | thiolester hydrolase activity double-stranded RNA binding Cajal body RNA-directed DNA methylation Golgi transport complex intra-Golgi vesicle-mediated transport seed germination RNA splicing extracellular space double-stranded DNA binding cysteine-type endopeptidase activity Lysosome Fatty acid metabolism fatty acid biosynthetic process proteolysis involved in cellular protein catabolic process | details |
| CFinderADM000941 | ribose-5-phosphate isomerase activity pentose-phosphate shunt, non-oxidative branch intracellular organelle part hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 Transcription_related, Transcription factor: bZIP negative regulation of catalytic activity cell wall modification pectinesterase inhibitor activity aspartyl esterase activity pectin catabolic process pectinesterase activity heterocyclic compound binding organic cyclic compound binding Spliceosome vacuole cell wall Golgi apparatus extracellular region sequence-specific DNA binding formation of glycosidic bonds, GlycosylTransferases: GTnc transcription factor activity, sequence-specific DNA binding transmembrane transport | details |
| CFinderADM001188 | methionine adenosyltransferase activity regulation of leaf development S-adenosylmethionine biosynthetic process Circadian rhythm S-adenosyl-L-methionine cycle II 2'-deoxymugineic acid phytosiderophore biosynthesis L-methionine degradation I (to L-homocysteine) L-methionine salvage cycle I (bacteria and plants) L-methionine salvage cycle II (plants) S-adenosyl-L-methionine biosynthesis one-carbon metabolic process Transcription_related, Transcription factor: TCP ethylene biosynthesis I (plants) Biosynthesis of amino acids | details |
| CFinderADM001888 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity dihydropteroate synthase activity 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Folate biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc tetrahydrofolate biosynthesis II folic acid-containing compound biosynthetic process transferase activity, transferring glycosyl groups Golgi membrane cell wall organization kinase activity phosphorylation | details |
| CFinderADM001889 | regulation of leaf development Circadian rhythm formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: TCP transferase activity, transferring glycosyl groups Golgi membrane cell wall organization mitochondrion | details |
Expression profiles
 Show details about module gene expression profiling |