CFinderADM000965's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| S-methyl-5'-thioadenosine degradation I | 3.47E-06 | plantCyc |
| S-methyl-5'-thioadenosine degradation II | 3.47E-06 | plantCyc |
| Transcription_related, Transcription factor: zf-HD | 1.06E-05 | TF family |
| nucleoside metabolic process | 3.60E-05 | GO:0009116 |
| Cysteine and methionine metabolism | 0.000211555 | KEGG pathway |
| benzoate biosynthesis I (CoA-dependent, β-oxidative) | 0.000768886 | plantCyc |
| metabolic process | 0.008861438 | GO:0008152 |
| catalytic activity | 0.025233348 | GO:0003824 |
| hydrolase activity | 0.030488192 | GO:0016787 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007838 | AT5G16080 (2.00E-39) | AtCXE17|carboxyesterase 17 |
| CRO_T013634 | - | - |
| CRO_T019792 | AT4G22190 (5.00E-47) | unknown protein |
| CRO_T022111 | AT4G38800 (7.00E-77) | ATMTAN1|ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 1; MTAN1|METHYLTHIOADENOSINE NUCLEOSIDASE 1 |
| CRO_T026545 | AT4G24660 (6.00E-56) | ATHB22|HOMEOBOX PROTEIN 22; MEE68|MATERNAL EFFECT EMBRYO ARREST 68; ZHD2|ZINC FINGER HOMEODOMAIN 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001055 | alpha-1,2-mannosyltransferase activity ATP transmembrane transporter activity formation of glycosidic bonds, GlycosylTransferases: GTnc diphosphate-fructose-6-phosphate 1-phosphotransferase activity Transcription_related, Transcription factor: zf-HD mannosylation anther development ATP transport glycolytic process through fructose-6-phosphate 6-phosphofructokinase activity Calcium signaling pathway ER-associated ubiquitin-dependent protein catabolic process carbohydrate phosphorylation Glycolysis / Gluconeogenesis protein N-glycosylation (eukaryotic, high mannose) N-Glycan biosynthesis glycolysis IV (plant cytosol) benzoate biosynthesis I (CoA-dependent, β-oxidative) mitochondrial inner membrane metabolic process transmembrane transport endoplasmic reticulum hydrolase activity | details |
| CFinderADM001490 | soluble NSF attachment protein activity SNARE complex disassembly anthocyanin-containing compound metabolic process syntaxin binding shade avoidance Transcription_related, Transcription factor: zf-HD entrainment of circadian clock pyrimidine nucleoside salvage photoperiodism, flowering membrane fusion pyrimidine nucleobase metabolic process regulation of stomatal movement uridine kinase activity photorespiration nuclear body positive regulation of proteasomal ubiquitin-dependent protein catabolic process photomorphogenesis chloroplast part Autophagy - yeast SNARE complex identical protein binding DNA repair Ubiquitin mediated proteolysis ubiquitin protein ligase activity vacuolar membrane intracellular protein transport protein ubiquitination Ubiquitin_Proteasome_system, E3 adaptor: DWD Carbon metabolism cytosol | details |
| CFinderADM002045 | Hsp70 protein binding glucose-6-phosphate isomerase activity heat acclimation protein oligomerization defense response to fungus, incompatible interaction gluconeogenesis oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GDP-mannose biosynthesis sucrose degradation III (sucrose invertase) starch biosynthesis sucrose biosynthesis II cellular response to oxidative stress sulfate assimilation sucrose biosynthesis I (from photosynthesis) protein disulfide oxidoreductase activity glycolytic process gluconeogenesis I glycolysis I (from glucose 6-phosphate) cell redox homeostasis protein folding Ubiquitin_Proteasome_system, E3 adaptor: DWD RNA transport Carbon metabolism | details |
| CFinderADM002307 | UDP-α-D-glucuronate biosynthesis (from myo-inositol) formation of glycosidic bonds, GlycosylTransferases: GTnc Other types of O-glycan biosynthesis proteasome assembly phosphotransferase activity, alcohol group as acceptor proteasome complex Pentose and glucuronate interconversions transferase activity, transferring glycosyl groups Golgi membrane cell wall organization kinase activity phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |