CFinderADM000988's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein phosphatase type 2A regulator activity | 2.69E-05 | GO:0008601 |
| regulation of protein phosphatase type 2A activity | 6.33E-05 | GO:0034047 |
| Transcription_related, Transcription regulator: SWI/SNF-BAF60b | 7.48E-05 | TF family |
| protein phosphatase type 2A complex | 0.000165084 | GO:0000159 |
| nucleoplasm | 0.000437678 | GO:0005654 |
| signal transduction | 0.001494523 | GO:0007165 |
| mRNA surveillance pathway | 0.00337354 | KEGG pathway |
| RNA transport | 0.005491201 | KEGG pathway |
| nucleolus | 0.005731715 | GO:0005730 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.00630987 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004702 | AT5G14170 (0) | CHC1|SWIB/MDM2 domain superfamily protein |
| CRO_T018063 | AT5G13660 (2.00E-04) | unknown protein |
| CRO_T021426 | AT1G11400 (2.00E-27) | PYM|partner of Y14-MAGO |
| CRO_T023510 | - | - |
| CRO_T032008 | - | - |
| CRO_T033344 | AT1G13460 (2.00E-167) | Protein phosphatase 2A regulatory B subunit family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001897 | mRNA surveillance pathway ribonuclease activity RNA phosphodiester bond hydrolysis regulation of protein phosphatase type 2A activity protein phosphatase type 2A complex protein phosphatase type 2A regulator activity signal transduction RNA transport intracellular membrane-bounded organelle nucleic acid binding nucleotide binding | details |
| CFinderADM002236 | protein phosphatase type 2A complex protein phosphatase type 2A regulator activity regulation of protein phosphatase type 2A activity signal transduction mRNA surveillance pathway RNA degradation | details |
Expression profiles
 Show details about module gene expression profiling |