CFinderADM000994's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 3.92E-05 | cazy family |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 3.92E-05 | cazy family |
| root epidermal cell differentiation | 0.000172606 | GO:0010053 |
| regulation of salicylic acid metabolic process | 0.000172606 | GO:0010337 |
| cell wall macromolecule catabolic process | 0.00021468 | GO:0016998 |
| response to nitrate | 0.000316008 | GO:0010167 |
| zinc ion transmembrane transporter activity | 0.000624879 | GO:0005385 |
| chitinase activity | 0.000624879 | GO:0004568 |
| chitin catabolic process | 0.000701904 | GO:0006032 |
| multidimensional cell growth | 0.000802168 | GO:0009825 |
| zinc II ion transmembrane transport | 0.000902919 | GO:0071577 |
| response to heat | 0.00116058 | GO:0009408 |
| response to cytokinin | 0.001509368 | GO:0009735 |
| response to water deprivation | 0.001616679 | GO:0009414 |
| cellulose biosynthetic process | 0.001616679 | GO:0030244 |
| response to salt stress | 0.001963192 | GO:0009651 |
| polysaccharide binding | 0.002824472 | GO:0030247 |
| RNA transport | 0.007101465 | KEGG pathway |
| integral component of membrane | 0.011869577 | GO:0016021 |
| apoplast | 0.011869577 | GO:0048046 |
| Golgi apparatus | 0.021067971 | GO:0005794 |
| metabolic process | 0.041079173 | GO:0008152 |
| oxidoreductase activity | 0.041679687 | GO:0016491 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000578 | AT2G14680 (1.00E-112) | MEE13|maternal effect embryo arrest 13 |
| CRO_T002979 | AT4G22290 (1.00E-49) | Ubiquitin-specific protease family C19-related protein |
| CRO_T004382 | AT1G02180 (1.00E-33) | ferredoxin-related |
| CRO_T012527 | AT3G16920 (1.00E-133) | CTL2|chitinase-like protein 2 |
| CRO_T015179 | AT3G12750 (5.00E-60) | ZIP1|zinc transporter 1 precursor |
| CRO_T016226 | AT1G26100 (8.00E-71) | Cytochrome b561/ferric reductase transmembrane protein family |
| CRO_T020714 | AT2G16650 (1.00E-143) | PRORP2|proteinaceous RNase P 2 |
| CRO_T031800 | AT5G61340 (3.00E-06) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001120 | Protein_kinases_phosphatases, PPC:1.1.1: Leucine-rich transmembrane protein kinase/Strubbelig Receptor Family 1 integral component of membrane polysaccharide binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein kinase activity | details |
| CFinderADM001251 | Mitophagy - animal mitochondrion organization ribosomal protein import into nucleus protein import into nucleus, translocation protein import into nucleus, docking integral component of mitochondrial outer membrane nuclear periphery nuclear membrane NLS-bearing protein import into nucleus nuclear localization sequence binding Ran GTPase binding small GTPase mediated signal transduction protein transporter activity GTPase activity cell wall calcium ion binding GTP binding | details |
| CFinderADM001698 | Alzheimer's disease NEDD8 activating enzyme activity protein neddylation Ubiquitin_Proteasome_system, E1: ThiF phosphatidylinositol binding | details |
| CFinderADM002095 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc regulation of salicylic acid metabolic process root epidermal cell differentiation cell wall macromolecule catabolic process response to nitrate phosphatidate metabolism, as a signaling molecule multidimensional cell growth chitin catabolic process cellulose catabolic process chitinase activity cellulase activity homogalacturonan degradation response to heat cell wall modification response to cytokinin cellulose biosynthetic process response to water deprivation aspartyl esterase activity pectinesterase inhibitor activity hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 negative regulation of catalytic activity response to salt stress pectinesterase activity pectin catabolic process polysaccharide binding Protein processing in endoplasmic reticulum Golgi apparatus apoplast cell wall hydrolase activity integral component of membrane | details |
| CFinderADM002154 | transmembrane receptor protein kinase activity Cell cycle - Caulobacter chaperone binding ATP-dependent peptidase activity mitochondrial matrix protein import into mitochondrial matrix mitochondrial inner membrane unfolded protein binding helicase activity protein catabolic process RNA degradation 2-alkenal reductase [NAD(P)] activity signal transduction RNA transport ATP binding protein folding nucleic acid binding proteolysis metabolic process | details |
| CFinderADM002272 | protein ubiquitination involved in ubiquitin-dependent protein catabolic process Ubiquitin mediated proteolysis ubiquitin-protein transferase activity | details |
| CFinderADM002303 | Legionellosis adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc regulation of salicylic acid metabolic process root epidermal cell differentiation cell wall macromolecule catabolic process response to nitrate chitinase activity cellulase activity cellulose catabolic process multidimensional cell growth chitin catabolic process response to heat response to cytokinin response to water deprivation cellulose biosynthetic process response to salt stress polysaccharide binding apoplast Golgi apparatus | details |
Expression profiles
 Show details about module gene expression profiling |