CFinderADM001016's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| systemic acquired resistance | 0.000118078 | GO:0009627 |
| N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity | 0.000140081 | GO:0003992 |
| oxidoreductase activity, acting on the CH-CH group of donors | 0.000140081 | GO:0016627 |
| interspecies interaction between organisms | 0.000141627 | GO:0044419 |
| nucleobase-containing compound metabolic process | 0.00017886 | GO:0006139 |
| primary root development | 0.00017886 | GO:0080022 |
| 2-Oxocarboxylic acid metabolism | 0.000211555 | KEGG pathway |
| arginine biosynthetic process | 0.000268667 | GO:0006526 |
| very long chain fatty acid biosynthesis I | 0.000716717 | plantCyc |
| very long chain fatty acid biosynthesis II | 0.000716717 | plantCyc |
| response to water deprivation | 0.000967134 | GO:0009414 |
| positive regulation of transcription, DNA-templated | 0.001009568 | GO:0045893 |
| defense response to bacterium | 0.001056836 | GO:0042742 |
| aspartic-type endopeptidase activity | 0.001521158 | GO:0004190 |
| response to abscisic acid | 0.001915353 | GO:0009737 |
| lipid metabolic process | 0.002337247 | GO:0006629 |
| methyltransferase activity | 0.0042276 | GO:0008168 |
| copper ion binding | 0.0042276 | GO:0005507 |
| pyridoxal phosphate binding | 0.004406218 | GO:0030170 |
| methylation | 0.009109949 | GO:0032259 |
| proteolysis | 0.015665207 | GO:0006508 |
| endoplasmic reticulum | 0.035273383 | GO:0005783 |
| chloroplast stroma | 0.038915627 | GO:0009570 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000942 | AT2G38050 (1.00E-15) | DET2|DE-ETIOLATED 2; DWF6|DWARF 6 |
| CRO_T001663 | AT1G80600 (7.00E-62) | TUP5|TUMOR PRONE 5; WIN1|HOPW1-1-interacting 1 |
| CRO_T011923 | AT1G65240 (7.00E-27) | Eukaryotic aspartyl protease family protein |
| CRO_T016874 | AT4G10760 (1.00E-41) | EMB1706|EMBRYO DEFECTIVE 1706; MTA|mRNAadenosine methylase |
| CRO_T017161 | AT3G56290 (9.00E-56) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM002034 | formation of glycosidic bonds, GlycosylTransferases: GTnc stem cell fate determination Golgi vesicle docking Golgi to plasma membrane protein transport meristem maintenance cellular calcium ion homeostasis post-translational protein modification Golgi stack pollen maturation oligosaccharyltransferase complex oxidoreductase activity, acting on the CH-CH group of donors cation-transporting ATPase activity dolichyl-diphosphooligosaccharide-protein glycotransferase activity protein N-linked glycosylation via asparagine cellular response to phosphate starvation pollen germination cation transmembrane transport intra-Golgi vesicle-mediated transport Autophagy - yeast N-Glycan biosynthesis protein polyubiquitination very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II protein ubiquitination involved in ubiquitin-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process ATPase activity lipid metabolic process Ubiquitin_Proteasome_system, E3: U-box ubiquitin protein ligase activity endoplasmic reticulum integral component of plasma membrane Ubiquitin_Proteasome_system, E3: RING nucleotide binding | details |
Expression profiles
 Show details about module gene expression profiling |