CFinderADM001070's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| phosphatidylethanolamine biosynthesis I | 3.53E-06 | plantCyc |
| regulation of leaf development | 5.17E-05 | GO:2000024 |
| maturation of 5.8S rRNA | 5.17E-05 | GO:0000460 |
| maturation of LSU-rRNA | 8.04E-05 | GO:0000470 |
| intra-Golgi vesicle-mediated transport | 0.000120502 | GO:0006891 |
| Ran GTPase binding | 0.000165166 | GO:0008536 |
| nucleotidyltransferase activity | 0.00019385 | GO:0016779 |
| Transcription_related, Transcription factor: TCP | 0.000264799 | TF family |
| Golgi transport complex | 0.000374921 | GO:0017119 |
| preribosome, large subunit precursor | 0.00057923 | GO:0030687 |
| RNA transport | 0.002712166 | KEGG pathway |
| intracellular protein transport | 0.003068351 | GO:0006886 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.006505237 | ubs family |
| nucleolus | 0.006799243 | GO:0005730 |
| Ribosome | 0.006799243 | KEGG pathway |
| intracellular | 0.01344414 | GO:0005622 |
| plasmodesma | 0.01344414 | GO:0009506 |
| integral component of membrane | 0.030358345 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006559 | AT1G35560 (8.00E-24) | TCP23|TCP domain protein 23 |
| CRO_T008758 | AT5G06360 (1.00E-124) | Ribosomal protein S8e family protein |
| CRO_T024863 | AT5G17020 (9.00E-109) | ATXPO1|EXPORTIN 1; HIT2|HEAT-INTOLERANT 2; XPO1A|exportin 1A |
| CRO_T025367 | AT5G11980 (0) | conserved oligomeric Golgi complex component-related / COG complex component-related |
| CRO_T030566 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001636 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity negative regulation of reductive pentose-phosphate cycle phosphatidylethanolamine biosynthesis I tubulin complex assembly Ran GTPase binding RNA splicing protein complex gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt single-organism cellular process intracellular protein transport protein folding RNA transport Spliceosome Ubiquitin_Proteasome_system, E3 adaptor: DWD metabolic process | details |
| CFinderADM001637 | galactolipid biosynthetic process hydrogen peroxide biosynthetic process tubulin complex assembly regulation of leaf development mitochondrial outer membrane protein complex Transcription_related, Transcription factor: TCP iron-sulfur cluster binding iron-sulfur cluster assembly single-organism cellular process protein folding iron ion binding | details |
| CFinderADM001805 | phosphatidylethanolamine biosynthesis I negative regulation of reductive pentose-phosphate cycle Ubiquitin_Proteasome_system, E3 adaptor: DDB1 red, far-red light phototransduction nucleotide-excision repair protein complex cullin-RING ubiquitin ligase complex Ran GTPase binding damaged DNA binding proteasome-mediated ubiquitin-dependent protein catabolic process methyltransferase activity Ubiquitin mediated proteolysis cellular process RNA transport intracellular protein transport Ubiquitin_Proteasome_system, E3 adaptor: DWD protein ubiquitination methylation intracellular | details |
Expression profiles
 Show details about module gene expression profiling |