CFinderADM001092's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| detection of calcium ion | 1.28E-05 | GO:0005513 |
| methionyl-tRNA aminoacylation | 1.28E-05 | GO:0006431 |
| regulation of calcium or calmodulin-mediated signal transduction in response to host | 1.28E-05 | GO:0075177 |
| modulation by symbiont of host calcium or calmodulin-mediated signal transduction | 1.59E-05 | GO:0075133 |
| methionine-tRNA ligase activity | 2.55E-05 | GO:0004825 |
| vacuolar proton-transporting V-type ATPase complex assembly | 2.68E-05 | GO:0070072 |
| regulation of photomorphogenesis | 2.98E-05 | GO:0010099 |
| ATPase binding | 3.19E-05 | GO:0051117 |
| calcium-mediated signaling | 4.10E-05 | GO:0019722 |
| Selenocompound metabolism | 4.15E-05 | KEGG pathway |
| vacuolar acidification | 4.38E-05 | GO:0007035 |
| plant-type vacuole | 8.04E-05 | GO:0000325 |
| vacuolar proton-transporting V-type ATPase, V0 domain | 8.04E-05 | GO:0000220 |
| tRNA binding | 0.000128721 | GO:0000049 |
| Ras signaling pathway | 0.000158895 | KEGG pathway |
| cytosol | 0.000271752 | GO:0005829 |
| ATP hydrolysis coupled proton transport | 0.000395817 | GO:0015991 |
| proton-transporting ATPase activity, rotational mechanism | 0.000593284 | GO:0046961 |
| ATP synthesis coupled proton transport | 0.000627562 | GO:0015986 |
| protein binding | 0.001973884 | GO:0005515 |
| 2-alkenal reductase [NAD(P)] activity | 0.002048986 | GO:0032440 |
| vacuolar membrane | 0.005562206 | GO:0005774 |
| calcium ion binding | 0.006455615 | GO:0005509 |
| endoplasmic reticulum | 0.007564564 | GO:0005783 |
| Golgi apparatus | 0.007564564 | GO:0005794 |
| Oxidative phosphorylation | 0.008510416 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T010001 | AT1G05990 (7.00E-25) | RHS1|ROOT HAIR SPECIFIC 1 |
| CRO_T010513 | AT2G19580 (3.00E-95) | TET2|tetraspanin2 |
| CRO_T018914 | AT4G13780 (0) | methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative |
| CRO_T026379 | AT3G51050 (6.00E-177) | FG-GAP repeat-containing protein |
| CRO_T030514 | AT2G21410 (0) | VHA-A2|vacuolar proton ATPase A2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001283 | proton-transporting ATP synthase complex assembly gibberellin catabolic process C-19 gibberellin 2-beta-dioxygenase activity response to light stimulus Protein_kinases_phosphatases, PPC:1.9.1: CRPK1 Like Kinase (Types 1 and 2) RNA secondary structure unwinding Diterpenoid biosynthesis NF-kappa B signaling pathway Plant-pathogen interaction Ribosome biogenesis in eukaryotes ATP-dependent RNA helicase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Golgi apparatus vacuolar membrane endoplasmic reticulum calcium ion binding ATP binding | details |
| CFinderADM001743 | Aminoacyl-tRNA biosynthesis mitochondrial alanyl-tRNA aminoacylation tRNA aminoacylation for protein translation SRP-dependent cotranslational protein targeting to membrane alanine-tRNA ligase activity aminoacyl-tRNA ligase activity 7S RNA binding tRNA binding tRNA modification signal recognition particle, endoplasmic reticulum targeting Protein export amino acid binding GTPase activity GTP binding catalytic activity vacuolar membrane endoplasmic reticulum Golgi apparatus | details |
Expression profiles
 Show details about module gene expression profiling |