CFinderADM001123's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP90A | 7.07E-07 | CYP450 family |
| anther wall tapetum cell differentiation | 3.39E-05 | GO:0048657 |
| Brassinosteroid biosynthesis | 4.47E-05 | KEGG pathway |
| brassinosteroid biosynthesis I | 6.86E-05 | plantCyc |
| brassinosteroid biosynthesis II | 6.86E-05 | plantCyc |
| glycerophosphodiester phosphodiesterase activity | 8.19E-05 | GO:0008889 |
| pollen exine formation | 0.000124228 | GO:0010584 |
| positive regulation of flower development | 0.000124228 | GO:0009911 |
| response to UV-B | 0.000148156 | GO:0010224 |
| brassinosteroid homeostasis | 0.000465325 | GO:0010268 |
| brassinosteroid biosynthetic process | 0.000465325 | GO:0016132 |
| sterol metabolic process | 0.000478233 | GO:0016125 |
| lipid metabolic process | 0.002097694 | GO:0006629 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 0.006291859 | GO:0016705 |
| monooxygenase activity | 0.006291859 | GO:0004497 |
| transporter activity | 0.006291859 | GO:0005215 |
| transport | 0.00966168 | GO:0006810 |
| iron ion binding | 0.017354223 | GO:0005506 |
| heme binding | 0.017544094 | GO:0020037 |
| intracellular | 0.027864989 | GO:0005622 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002773 | AT5G19930 (6.00E-74) | Protein of unknown function DUF92, transmembrane |
| CRO_T011749 | AT3G55646 (9.00E-14) | unknown protein |
| CRO_T012738 | AT1G01630 (3.00E-20) | Sec14p-like phosphatidylinositol transfer family protein |
| CRO_T021066 | AT1G66970 (1.00E-30) | GDPDL1|Glycerophosphodiester phosphodiesterase (GDPD) like 1; SVL2|SHV3-like 2 |
| CRO_T028999 | AT5G45340 (2.00E-64) | CYP707A3|cytochrome P450, family 707, subfamily A, polypeptide 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001122 | Cytochrome_P450, Cytochrome P450: CYP90A L-lysine catabolic process anther wall tapetum cell differentiation saccharopine dehydrogenase (NADP+, L-lysine-forming) activity Transcription_related, Transcription factor: NF-YB brassinosteroid biosynthesis I brassinosteroid biosynthesis II pollen exine formation positive regulation of flower development response to UV-B Antigen processing and presentation Brassinosteroid biosynthesis Lysine degradation brassinosteroid biosynthetic process brassinosteroid homeostasis sterol metabolic process oxidation-reduction process protein heterodimerization activity monooxygenase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen sequence-specific DNA binding iron ion binding heme binding regulation of transcription, DNA-templated | details |
| CFinderADM001500 | glycerophosphodiester phosphodiesterase activity RNA modification lipid metabolic process hydrolase activity chloroplast integral component of membrane | details |
| CFinderADM001633 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity hydroxyisourate hydrolase activity urate degradation to allantoin I purine nucleobase metabolic process allantoin biosynthetic process regulation of cell growth by extracellular stimulus protein homotetramerization formation of glycosidic bonds, GlycosylTransferases: GTnc extrinsic component of cytoplasmic side of plasma membrane maturation of 5.8S rRNA proteasome assembly Other types of O-glycan biosynthesis brassinosteroid mediated signaling pathway maturation of LSU-rRNA proteasome complex cytosol preribosome, large subunit precursor transferase activity, transferring glycosyl groups Peroxisome Golgi membrane transporter activity cell wall organization Purine metabolism nucleolus transport intracellular nucleic acid binding | details |
| CFinderADM002198 | Cytochrome_P450, Cytochrome P450: CYP90A anther wall tapetum cell differentiation brassinosteroid biosynthesis I brassinosteroid biosynthesis II glycerophosphodiester phosphodiesterase activity Brassinosteroid biosynthesis positive regulation of flower development pollen exine formation response to UV-B spliceosomal complex cellular transition metal ion homeostasis brassinosteroid homeostasis brassinosteroid biosynthetic process sterol metabolic process metal ion transport mRNA splicing, via spliceosome lipid binding transition metal ion binding response to stress lipid metabolic process Spliceosome monooxygenase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen iron ion binding heme binding integral component of membrane regulation of transcription, DNA-templated | details |
| CFinderADM002307 | UDP-α-D-glucuronate biosynthesis (from myo-inositol) formation of glycosidic bonds, GlycosylTransferases: GTnc Other types of O-glycan biosynthesis proteasome assembly phosphotransferase activity, alcohol group as acceptor proteasome complex Pentose and glucuronate interconversions transferase activity, transferring glycosyl groups Golgi membrane cell wall organization kinase activity phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |