CFinderADM001216's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| sulfoquinovosyl diacylglycerol biosynthesis | 3.53E-06 | plantCyc |
| UDPsulfoquinovose synthase activity | 8.78E-06 | GO:0046507 |
| glycolipid biosynthetic process | 1.15E-05 | GO:0009247 |
| sulfotransferase activity | 5.26E-05 | GO:0008146 |
| RNA methylation | 0.000120956 | GO:0001510 |
| coenzyme binding | 0.000756458 | GO:0050662 |
| Amino sugar and nucleotide sugar metabolism | 0.000773274 | KEGG pathway |
| methyltransferase activity | 0.002740551 | GO:0008168 |
| transport | 0.00524638 | GO:0006810 |
| RNA binding | 0.015413771 | GO:0003723 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007364 | AT1G30300 (4.00E-123) | Metallo-hydrolase/oxidoreductase superfamily protein |
| CRO_T020915 | AT1G10720 (2.00E-38) | BSD domain-containing protein |
| CRO_T024192 | AT4G38020 (6.00E-91) | tRNA/rRNA methyltransferase (SpoU) family protein |
| CRO_T025991 | AT5G48410 (2.00E-113) | ATGLR1.3|GLUTAMATE RECEPTOR 1.3 |
| CRO_T033279 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000411 | sulfoquinovosyl diacylglycerol biosynthesis glycolipid biosynthetic process UDPsulfoquinovose synthase activity sulfotransferase activity Amino sugar and nucleotide sugar metabolism coenzyme binding protein serine/threonine phosphatase activity protein dephosphorylation catalytic activity chloroplast | details |
| CFinderADM001349 | iron incorporation into metallo-sulfur cluster cysteine metabolic process response to selenium ion cysteine desulfurase activity xyloglucan 6-xylosyltransferase activity 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity selenocysteine lyase activity 3'-phospho-5'-adenylyl sulfate transmembrane transport selenium compound metabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc L-alanine biosynthesis III Selenocompound metabolism chloroplastic endopeptidase Clp complex molybdenum cofactor biosynthesis xyloglucan biosynthesis Protein_kinases_phosphatases, PPC:4.5.1: MAPK Family MAP kinase activity integral component of endoplasmic reticulum membrane integral component of Golgi membrane Cell cycle - Caulobacter carbohydrate transport MAPK cascade cell part chloroplast thylakoid serine-type endopeptidase activity MAPK signaling pathway - plant pyridoxal phosphate binding chloroplast envelope proteolysis intracellular chloroplast stroma | details |
Expression profiles
 Show details about module gene expression profiling |