CFinderADM001226's detailed annotation
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
Function Annotation | FDR | Gene Ontolog |
---|---|---|
Thiamine metabolism | 3.20E-05 | KEGG pathway |
methylerythritol phosphate pathway I | 4.44E-05 | plantCyc |
methylerythritol phosphate pathway II | 4.44E-05 | plantCyc |
ubiquitin ligase complex | 0.000124097 | GO:0000151 |
positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 0.000138344 | GO:0032436 |
ubiquitin conjugating enzyme binding | 0.000204625 | GO:0031624 |
protein polyubiquitination | 0.000322463 | GO:0000209 |
protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 0.000468238 | GO:0042787 |
ubiquitin protein ligase activity | 0.00360344 | GO:0061630 |
Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.004683771 | ubs family |
binding | 0.016649813 | GO:0005488 |
cytoplasm | 0.046688906 | GO:0005737 |
Module member annotation
Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
---|---|---|
CRO_T000400 | AT1G65430 (3.00E-45) | ARI8|ARIADNE 8; ATARI8|ARABIDOPSIS ARIADNE 8 |
CRO_T005690 | AT5G11380 (4.00E-74) | DXPS3|1-deoxy-D-xylulose 5-phosphate synthase 3; DXS3|1-deoxy-D-xylulose 5-phosphate (DXP) synthase 3 |
CRO_T009847 | AT3G51120 (3.00E-14) | DNA binding; zinc ion binding; nucleic acid binding; nucleic acid binding |
CRO_T010066 | AT1G31810 (7.00E-78) | AFH14|Formin Homology 14 |
CRO_T022822 | - | - |
Direct connection functional modules
Module ID | Function Annotation | Overlap condition |
---|---|---|
CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
CFinderADM000271 | details | |
CFinderADM001225 | D-erythro-sphingosine kinase activity ceramide degradation sphingolipid biosynthetic process sphingolipid biosynthesis (plants) ubiquitin conjugating enzyme binding positive regulation of proteasomal ubiquitin-dependent protein catabolic process ubiquitin ligase complex protein polyubiquitination protein ubiquitination involved in ubiquitin-dependent protein catabolic process ubiquitin protein ligase activity phosphorylation zinc ion binding | details |
Expression profiles
Show details about module gene expression profiling |